Statistics


Genome Structure and Organisation

Genome Size (sequenced portion, excluding rDNA) 12.57Mbp
Number of Chromosomes 3
Chromosome Size Range 2.45Mbp - 5.58Mbp
Gene Count (protein coding genes on Chr I, II and III) 5123
Gene Count excluding dubious genes (protein coding genes on Chr I, II and III) 5046
Gene Density (genes per Mb) 554.57
Genome GC Content 36.06%
Intergenic Length (mean for protein coding genes) 223.31
Intergenic GC Content (protein coding genes) 28.83%
Mitochondrial Genome Size 19.43kbp
Mitochondrial GC Content 30.09%
Telomeric Located Contig Size 20.00kbp
Telomeric Located Contig GC Content 33.17%

Chromosome (I, II and III) Transcript Breakdown

Feature Type Count Gene Density GC Content (%) Mean Length (bp)
Gene Exon Intron (genes per Mb) Gene Exon (All) Exon (Coding) Intron 5' UTR 3' UTR Gene Exon Intron 5' UTR 3' UTR
rRNA474703.7445.7245.72527.53527.53
snoRNA555614.3736.3636.6330.36139.62131.13336.00
tRNA1711962513.6053.7954.1338.4977.3265.9711.64
pseudogene2953242.3138.9239.2631.511,065.41557.0457.25
mRNA (protein_coding)5123104235300407.5037.0837.3939.6329.7133.2932.282,150.051,014.4983.17292.57429.80
ncRNA154015455122.5035.8035.8027.941,244.521,240.3349.40
snRNA7810.5632.7532.7334.00553.14477.7550.00

Mitochondrial Transcript Breakdown

Feature Type Count GC Content (%) Mean Length (bp)
rRNA231.972,122.00
mRNA (protein_coding)1129.391,393.00
tRNA2538.7574.52

Telomeric Located Contic Transcript Breakdown

Feature Type Count GC Content (%) Mean Length (bp)
mRNA (protein_coding)538.461,428.00

Mating Type Region

Feature Type Count GC Content (%) Mean Length (bp)
mRNA (protein_coding)435.94395.75

Release Version: 30th Aug 2014