id: gomodel:6690711d00001545 title: 'L-serine biosynthetic process (GO:0006564), cysteine biosynthetic process from serine (GO:0006535) ' taxon: NCBITaxon:4896 status: production comments: - 'basic pathway https://www.researchgate.net/publication/6852717_A_Peroxisomal_Glutathione_Transferase_of_Saccharomyces_cerevisiae_Is_Functionally_Related_to_Sulfur_Amino_Acid_Metabolism/figures?lo=1 ' - 'see https://github.com/geneontology/go-ontology/issues/28833 foir an explanation of the alternative cysteine synthase specificity/inputs ' activities: - id: gomodel:6690711d00001545/67c10cc400004797 enabled_by: type: EnabledByGeneProductAssociation evidence: - term: ECO:0000250 reference: GO_REF:0000024 with_objects: - UniProtKB:Q9H9B4 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org term: PomBase:SPAC17G6.15c molecular_function: type: MolecularFunctionAssociation term: GO:0015194 occurs_in: type: CellularAnatomicalEntityAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000125190 - MGI:MGI:2137681 - UniProtKB:Q9H9B4 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org term: GO:0005743 part_of: type: BiologicalProcessAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000125190 - FB:FBgn0037239 - UniProtKB:Q9BWM7 - FB:FBgn0036843 - UniProtKB:Q9H9B4 - UniProtKB:Q96NB2 - MGI:MGI:2137677 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org - term: ECO:0000250 reference: GO_REF:0000024 with_objects: - UniProtKB:Q9H9B4 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org term: GO:0140300 has_input: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org term: CHEBI:17115 has_output: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org term: CHEBI:17115 - id: gomodel:6690711d00001545/678073a900001434 enabled_by: type: EnabledByGeneProductAssociation evidence: - term: ECO:0000314 reference: PMID:28581482 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: PomBase:SPBC106.17c molecular_function: type: MolecularFunctionAssociation term: GO:0160210 occurs_in: type: CellularAnatomicalEntityAssociation evidence: - term: ECO:0000305 reference: PMID:16823372 with_objects: - GO:0160210 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-14' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: GO:0005759 part_of: type: BiologicalProcessAssociation evidence: - term: ECO:0000315 reference: PMID:27558664 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000107323 - PomBase:SPBC106.17c provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: GO:0006535 has_input: - type: MoleculeAssociation evidence: - term: ECO:0000314 reference: PMID:28581482 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org - term: ECO:0000314 reference: PMID:28581482 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org term: CHEBI:17115 - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org term: CHEBI:17115 has_output: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: CHEBI:134286 - id: gomodel:6690711d00001545/6690711d00001546 enabled_by: type: EnabledByGeneProductAssociation evidence: - term: ECO:0000250 reference: GO_REF:0000024 with_objects: - UniProtKB:P40054 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org term: PomBase:SPCC364.07 molecular_function: type: MolecularFunctionAssociation term: GO:0004617 occurs_in: type: CellularAnatomicalEntityAssociation evidence: - term: ECO:0007005 reference: PMID:16823372 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org term: GO:0005829 part_of: type: BiologicalProcessAssociation evidence: - term: ECO:0000250 reference: GO_REF:0000024 with_objects: - UniProtKB:P40054 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org term: GO:0006564 has_input: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org term: CHEBI:58272 has_output: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-28' provided_by: - http://www.pombase.org term: CHEBI:18110 causal_associations: - type: CausalAssociation evidence: - term: ECO:0000250 reference: GO_REF:0000024 with_objects: - UniProtKB:P40054 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org predicate: RO:0002413 downstream_activity: gomodel:6690711d00001545/6690711d00001553 - id: gomodel:6690711d00001545/67e5e74400003929 enabled_by: type: EnabledByGeneProductAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000095308 - UniProtKB:P21888 - SGD:S000005191 - UniProtKB:P49589 - UniProtKB:Q9HA77 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org term: PomBase:SPAC29E6.06c molecular_function: type: MolecularFunctionAssociation term: GO:0004817 occurs_in: type: CellularAnatomicalEntityAssociation evidence: - term: ECO:0000305 reference: GO_REF:0000111 with_objects: - GO:0004817 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org term: GO:0005759 part_of: type: BiologicalProcessAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000095308 - UniProtKB:P49589 - UniProtKB:Q9HA77 - SGD:S000005191 - UniProtKB:P21888 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org term: GO:0043038 has_input: - type: MoleculeAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000095308 - UniProtKB:P21888 - SGD:S000005191 - UniProtKB:P49589 - UniProtKB:Q9HA77 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org term: CHEBI:35235 - type: MoleculeAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000095308 - UniProtKB:P21888 - SGD:S000005191 - UniProtKB:P49589 - UniProtKB:Q9HA77 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org term: CHEBI:35235 - type: MoleculeAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000095308 - UniProtKB:P21888 - SGD:S000005191 - UniProtKB:P49589 - UniProtKB:Q9HA77 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org term: CHEBI:35235 - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-23' provided_by: - http://www.pombase.org term: PomBase:SPMITTRNACYS.01 has_output: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-23' provided_by: - http://www.pombase.org term: CHEBI:29152 - id: gomodel:6690711d00001545/67c10cc400001458 enabled_by: type: EnabledByGeneProductAssociation evidence: - term: ECO:0000316 reference: PMID:8765231 with_objects: - SGD:S000001635 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org - term: ECO:0000314 reference: PMID:2996957 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org - term: ECO:0000315 reference: PMID:8765231 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org term: PomBase:SPAC26F1.06 molecular_function: type: MolecularFunctionAssociation term: GO:0004619 occurs_in: type: CellularAnatomicalEntityAssociation evidence: - term: ECO:0007005 reference: PMID:16823372 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org term: GO:0005829 part_of: type: BiologicalProcessAssociation evidence: - term: ECO:0000266 reference: GO_REF:0000024 with_objects: - SGD:S000001635 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org term: GO:0061621 has_input: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-17' provided_by: - http://www.pombase.org term: CHEBI:58289 has_output: - type: MoleculeAssociation evidence: - term: ECO:0000316 reference: PMID:8765231 with_objects: - SGD:S000001635 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org - term: ECO:0000314 reference: PMID:2996957 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org - term: ECO:0000315 reference: PMID:8765231 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org - term: ECO:0000316 reference: PMID:8765231 with_objects: - SGD:S000001635 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org term: CHEBI:58272 - type: MoleculeAssociation evidence: - term: ECO:0000314 reference: PMID:2996957 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org - term: ECO:0000315 reference: PMID:8765231 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-06' provided_by: - http://www.pombase.org term: CHEBI:58272 - id: gomodel:6690711d00001545/67e5e74400003691 enabled_by: type: EnabledByGeneProductAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN002623036 - SGD:S000002430 - UniProtKB:Q9N0F3 - ZFIN:ZDB-GENE-040831-1 - UniProtKB:P49591 - SGD:S000001053 - UniProtKB:Q9HGT6 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org term: PomBase:SPAC25B8.06c molecular_function: type: MolecularFunctionAssociation term: GO:0004828 occurs_in: type: CellularAnatomicalEntityAssociation evidence: - term: ECO:0000305 reference: GO_REF:0000111 with_objects: - GO:0005739 - GO:0043039 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org term: GO:0005759 part_of: type: BiologicalProcessAssociation evidence: - term: ECO:0000305 reference: GO_REF:0000111 with_objects: - GO:0004828 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org term: GO:0043038 has_input: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-09' provided_by: - http://www.pombase.org term: CHEBI:17115 - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-23' provided_by: - http://www.pombase.org term: PomBase:SPMITTRNASER.02 - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-23' provided_by: - http://www.pombase.org term: PomBase:SPMITTRNASER.02 has_output: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-23' provided_by: - http://www.pombase.org term: CHEBI:29162 - id: gomodel:6690711d00001545/678073a900001423 enabled_by: type: EnabledByGeneProductAssociation evidence: - term: ECO:0000315 reference: PMID:14981292 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org - term: ECO:0000315 reference: PMID:17482430 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000034466 - UniProtKB:P37887 - WB:WBGene00019962 - PomBase:SPBC36.04 - TAIR:locus:2096454 - UniProtKB:Q43153 - UniProtKB:P9WP55 - TAIR:locus:2114804 - UniProtKB:P0ABK5 - TAIR:locus:2130419 - TAIR:locus:2043964 - UniProtKB:Q76MX2 - TAIR:locus:2082837 - WB:WBGene00010759 - WB:WBGene00013866 - TAIR:locus:2080417 - TAIR:locus:2143814 - WB:WBGene00007653 - TAIR:locus:2143754 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: PomBase:SPBC36.04 molecular_function: type: MolecularFunctionAssociation term: GO:0004124 occurs_in: type: CellularAnatomicalEntityAssociation evidence: - term: ECO:0007005 reference: PMID:16823372 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: GO:0005739 part_of: type: BiologicalProcessAssociation evidence: - term: ECO:0000315 reference: PMID:14981292 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org - term: ECO:0000315 reference: PMID:17482430 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000034466 - UniProtKB:P9WP55 - WB:WBGene00007653 - UniProtKB:P0ABK5 - PomBase:SPBC36.04 - SGD:S000003387 - WB:WBGene00019962 - WB:WBGene00010759 - UniProtKB:P37887 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: GO:0006535 has_input: - type: MoleculeAssociation evidence: - term: ECO:0000315 reference: PMID:14981292 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org - term: ECO:0000315 reference: PMID:17482430 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000034466 - UniProtKB:P37887 - WB:WBGene00019962 - PomBase:SPBC36.04 - TAIR:locus:2096454 - UniProtKB:Q43153 - UniProtKB:P9WP55 - TAIR:locus:2114804 - UniProtKB:P0ABK5 - TAIR:locus:2130419 - TAIR:locus:2043964 - UniProtKB:Q76MX2 - TAIR:locus:2082837 - WB:WBGene00010759 - WB:WBGene00013866 - TAIR:locus:2080417 - TAIR:locus:2143814 - WB:WBGene00007653 - TAIR:locus:2143754 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org - term: ECO:0000315 reference: PMID:14981292 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org - term: ECO:0000315 reference: PMID:17482430 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000034466 - UniProtKB:P37887 - WB:WBGene00019962 - PomBase:SPBC36.04 - TAIR:locus:2096454 - UniProtKB:Q43153 - UniProtKB:P9WP55 - TAIR:locus:2114804 - UniProtKB:P0ABK5 - TAIR:locus:2130419 - TAIR:locus:2043964 - UniProtKB:Q76MX2 - TAIR:locus:2082837 - WB:WBGene00010759 - WB:WBGene00013866 - TAIR:locus:2080417 - TAIR:locus:2143814 - WB:WBGene00007653 - TAIR:locus:2143754 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: CHEBI:134286 - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: CHEBI:16136 - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: CHEBI:134286 has_output: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: CHEBI:35235 - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-01-19' provided_by: - http://www.pombase.org term: CHEBI:26806 - id: gomodel:6690711d00001545/6690711d00001553 enabled_by: type: EnabledByGeneProductAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000475655 - UniProtKB:Q9Y617 - SGD:S000005710 - UniProtKB:P23721 - TAIR:locus:2127963 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org term: PomBase:SPAC1F12.07 molecular_function: type: MolecularFunctionAssociation term: GO:0004648 occurs_in: type: CellularAnatomicalEntityAssociation evidence: - term: ECO:0007005 reference: PMID:16823372 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org term: GO:0005829 part_of: type: BiologicalProcessAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000475655 - UniProtKB:Q9Y617 - SGD:S000005710 - UniProtKB:P23721 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org term: GO:0006564 has_input: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-28' provided_by: - http://www.pombase.org term: CHEBI:18110 - type: MoleculeAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000475655 - UniProtKB:Q9Y617 - SGD:S000005710 - UniProtKB:P23721 - TAIR:locus:2127963 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-28' provided_by: - http://www.pombase.org - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000475655 - UniProtKB:Q9Y617 - SGD:S000005710 - UniProtKB:P23721 - TAIR:locus:2127963 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-28' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-28' provided_by: - http://www.pombase.org term: CHEBI:18110 - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-23' provided_by: - http://www.pombase.org term: CHEBI:29985 - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-17' provided_by: - http://www.pombase.org term: CHEBI:57524 has_output: - type: MoleculeAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000475655 - UniProtKB:Q9Y617 - SGD:S000005710 - UniProtKB:P23721 - TAIR:locus:2127963 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-17' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-17' provided_by: - http://www.pombase.org term: CHEBI:16810 - type: MoleculeAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000475655 - UniProtKB:Q9Y617 - SGD:S000005710 - UniProtKB:P23721 - TAIR:locus:2127963 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-17' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-17' provided_by: - http://www.pombase.org term: CHEBI:16810 causal_associations: - type: CausalAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000475655 - UniProtKB:Q9Y617 - SGD:S000005710 - UniProtKB:P23721 - TAIR:locus:2127963 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org predicate: RO:0002413 downstream_activity: gomodel:6690711d00001545/6690711d00001561 - id: gomodel:6690711d00001545/6690711d00001561 enabled_by: type: EnabledByGeneProductAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000000002 - UniProtKB:O53289 - SGD:S000003440 - TAIR:locus:2027433 - UniProtKB:P78330 - UniProtKB:P0AGB0 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org term: PomBase:SPBC3H7.07c molecular_function: type: MolecularFunctionAssociation term: GO:0036424 occurs_in: type: CellularAnatomicalEntityAssociation evidence: - term: ECO:0000305 reference: GO_REF:0000111 with_objects: - GO:0036424 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-14' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org term: GO:0005829 part_of: type: BiologicalProcessAssociation evidence: - term: ECO:0000318 reference: GO_REF:0000033 with_objects: - PANTHER:PTN000000002 - UniProtKB:Q9I2Y2 - SGD:S000003440 - UniProtKB:P78330 - UniProtKB:P0AGB0 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-18' provided_by: - http://www.pombase.org term: GO:0006564 has_input: - type: MoleculeAssociation evidence: [] provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-03-17' provided_by: - http://www.pombase.org term: CHEBI:57524 has_output: - type: MoleculeAssociation evidence: - term: ECO:0000303 reference: GO_REF:0000024 provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-28' provided_by: - http://www.pombase.org provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2024-07-28' provided_by: - http://www.pombase.org term: CHEBI:17115 objects: - id: ECO:0000303 label: author statement without traceable support used in manual assertion type: gocam:Object - id: GO:0004617 label: phosphoglycerate dehydrogenase activity type: gocam:Object - id: PomBase:SPCC364.07 label: ser3 Spom type: gocam:Object - id: GO:0006564 label: L-serine biosynthetic process type: gocam:Object - id: GO:0005829 label: cytosol type: gocam:Object - id: ECO:0000250 label: sequence similarity evidence used in manual assertion type: gocam:Object - id: ECO:0007005 label: high throughput direct assay evidence used in manual assertion type: gocam:Object - id: GO:0004648 label: O-phospho-L-serine:2-oxoglutarate aminotransferase activity type: gocam:Object - id: PomBase:SPAC1F12.07 label: ser1 Spom type: gocam:Object - id: ECO:0000318 label: biological aspect of ancestor evidence used in manual assertion type: gocam:Object - id: GO:0036424 label: L-phosphoserine phosphatase activity type: gocam:Object - id: PomBase:SPBC3H7.07c label: ser2 Spom type: gocam:Object - id: ECO:0000305 label: curator inference used in manual assertion type: gocam:Object - id: CHEBI:17115 label: L-serine type: gocam:Object - id: CHEBI:58272 label: 3-phosphonato-D-glycerate(3-) type: gocam:Object - id: GO:0004619 label: phosphoglycerate mutase activity type: gocam:Object - id: PomBase:SPAC26F1.06 label: gpm1 Spom type: gocam:Object - id: GO:0061621 label: canonical glycolysis type: gocam:Object - id: ECO:0000316 label: genetic interaction evidence used in manual assertion type: gocam:Object - id: ECO:0000314 label: direct assay evidence used in manual assertion type: gocam:Object - id: ECO:0000315 label: mutant phenotype evidence used in manual assertion type: gocam:Object - id: ECO:0000266 label: sequence orthology evidence used in manual assertion type: gocam:Object - id: GO:0015194 label: L-serine transmembrane transporter activity type: gocam:Object - id: PomBase:SPAC17G6.15c label: fsf1 Spom type: gocam:Object - id: GO:0140300 label: serine import into mitochondrion type: gocam:Object - id: GO:0005743 label: mitochondrial inner membrane type: gocam:Object - id: GO:0005739 label: mitochondrion type: gocam:Object - id: CHEBI:16810 label: 2-oxoglutarate(2-) type: gocam:Object - id: CHEBI:57524 label: O-phosphonato-L-serine(2-) type: gocam:Object - id: CHEBI:58289 label: 2-phosphonato-D-glycerate(3-) type: gocam:Object - id: CHEBI:18110 label: 3-phosphonatooxypyruvate(3-) type: gocam:Object - id: GO:0004828 label: serine-tRNA ligase activity type: gocam:Object - id: PomBase:SPAC25B8.06c label: dia4 Spom type: gocam:Object - id: GO:0043038 label: amino acid activation type: gocam:Object - id: GO:0005759 label: mitochondrial matrix type: gocam:Object - id: GO:0004817 label: cysteine-tRNA ligase activity type: gocam:Object - id: PomBase:SPAC29E6.06c label: SPAC29E6.06c Spom type: gocam:Object - id: CHEBI:29985 label: L-glutamate(1-) type: gocam:Object - id: CHEBI:29152 label: Cys-tRNA(Cys) type: gocam:Object - id: PomBase:SPMITTRNACYS.01 label: SPMITTRNACYS.01 Spom type: gocam:Object - id: CHEBI:29162 label: Ser-tRNA(Ser) type: gocam:Object - id: PomBase:SPMITTRNASER.02 label: SPMITTRNASER.02 Spom type: gocam:Object - id: GO:0004124 label: cysteine synthase activity type: gocam:Object - id: PomBase:SPBC36.04 label: cys11 Spom type: gocam:Object - id: GO:0006535 label: cysteine biosynthetic process from serine type: gocam:Object - id: GO:0160210 label: L-serine O-succinyltransferase activity type: gocam:Object - id: PomBase:SPBC106.17c label: cys2 Spom type: gocam:Object - id: CHEBI:134286 label: O-succinyl-L-serine type: gocam:Object - id: CHEBI:16136 label: hydrogen sulfide type: gocam:Object - id: CHEBI:35235 label: L-cysteine zwitterion type: gocam:Object - id: CHEBI:26806 label: succinate type: gocam:Object provenances: - contributor: - https://orcid.org/0000-0001-6330-7526 date: '2025-04-23' provided_by: - http://www.pombase.org