id: gomodel:66c7d41500001171
title: vitamin B6 metabolic process (GO:0042816)
taxon: NCBITaxon:4896
status: production
date_modified: '2026-03-09'
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      reference: GO_REF:0000033
      with_objects:
      - PANTHER:PTN000056594
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      - http://www.pombase.org
    term: PomBase:SPAC6F6.11c
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    evidence:
    - term: ECO:0007005
      reference: PMID:16823372
      provenances:
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      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
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    - term: ECO:0000318
      reference: GO_REF:0000033
      with_objects:
      - PANTHER:PTN000056594
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    term: GO:0009443
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      with_objects:
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    predicate: RO:0002233
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    term: PomBase:SPAC222.08c
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    type: MolecularFunctionAssociation
    term: GO:0004359
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      reference: GO_REF:0000033
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    term: GO:0042823
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    predicate: RO:0002234
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    predicate: RO:0002234
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      with_objects:
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      - SGD:S000004701
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    predicate: RO:0002629
    downstream_activity: gomodel:66c7d41500001171/66c7d41500001270
  - type: CausalAssociation
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      reference: GO_REF:0000033
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    predicate: RO:0002629
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    term: PomBase:SPCC18.10
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    evidence:
    - term: ECO:0007005
      reference: PMID:16823372
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    term: GO:0005829
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      reference: GO_REF:0000033
      with_objects:
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    term: GO:0009443
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    predicate: RO:0002233
    molecule: gomodel:66c7d41500001171/66c7d41500001225
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- id: gomodel:66c7d41500001171/66c7d41500001185
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    - term: ECO:0000315
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    term: PomBase:SPAC9E9.11
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    term: GO:0005829
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    term: GO:0042821
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    term: PomBase:SPAC1093.02
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    - term: ECO:0000305
      reference: GO_REF:0000111
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    term: GO:0042818
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    term: PomBase:SPAC6F6.11c
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      with_objects:
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    predicate: RO:0002233
    molecule: gomodel:66c7d41500001171/66c7d41500001225
  - type: MoleculeAssociation
    evidence:
    - term: ECO:0000318
      reference: GO_REF:0000033
      with_objects:
      - PANTHER:PTN000056594
      - UniProtKB:P77150
      - UniProtKB:O00764
      - UniProtKB:P40191
      - RGD:621324
      - dictyBase:DDB_G0268628
      - TAIR:locus:2153789
      - MGI:MGI:1351869
      provenances:
      - contributor:
        - https://orcid.org/0009-0003-9059-1333
        date: '2024-09-03'
        provided_by:
        - http://www.pombase.org
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2024-09-03'
      provided_by:
      - http://www.pombase.org
    predicate: RO:0002234
    molecule: gomodel:66c7d41500001171/66c7d41500001209
molecules:
- id: gomodel:66c7d41500001171/66c7d41500001184
  term: CHEBI:16709
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/66c7d41500001225
  term: CHEBI:17310
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/69a0c46f00002297
  term: CHEBI:58589
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/69a0c46f00002308
  term: CHEBI:58359
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/69a0c46f00002311
  term: CHEBI:59776
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/69a0c46f00002314
  term: CHEBI:58273
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/66c7d41500001259
  term: CHEBI:58451
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/66c7d41500001209
  term: CHEBI:597326
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/66c7d41500001212
  term: CHEBI:16410
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/69a0c46f00002317
  term: CHEBI:43474
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/69a0c46f00002293
  term: CHEBI:28938
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/69a0c46f00002288
  term: CHEBI:16240
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
- id: gomodel:66c7d41500001171/69a0c46f00002320
  term: CHEBI:29985
  located_in:
    type: CellularAnatomicalEntityAssociation
    evidence: []
    provenances:
    - contributor:
      - https://orcid.org/0009-0003-9059-1333
      date: '2026-03-09'
      provided_by:
      - http://www.pombase.org
    term: GO:0005829
objects:
- id: GO:0050236
  label: pyridoxine 4-dehydrogenase (NADP+) activity
  type: gocam:Object
- id: PomBase:SPCC1281.04
  label: akr7 Spom
  type: gocam:Object
- id: GO:0042821
  label: pyridoxal biosynthetic process
  type: gocam:Object
- id: ECO:0000250
  label: sequence similarity evidence used in manual assertion
  type: gocam:Object
- id: CHEBI:16709
  label: pyridoxine
  type: gocam:Object
- id: PomBase:SPAC9E9.11
  label: plr1 Spom
  type: gocam:Object
- id: ECO:0000315
  label: mutant phenotype evidence used in manual assertion
  type: gocam:Object
- id: GO:0008478
  label: pyridoxal kinase activity
  type: gocam:Object
- id: PomBase:SPAC6F6.11c
  label: SPAC6F6.11c Spom
  type: gocam:Object
- id: GO:0009443
  label: pyridoxal 5'-phosphate salvage
  type: gocam:Object
- id: ECO:0000318
  label: biological aspect of ancestor evidence used in manual assertion
  type: gocam:Object
- id: PomBase:SPCC18.10
  label: SPCC18.10 Spom
  type: gocam:Object
- id: CHEBI:597326
  label: pyridoxal 5'-phosphate(2-)
  type: gocam:Object
- id: CHEBI:16410
  label: pyridoxamine
  type: gocam:Object
- id: CHEBI:17310
  label: pyridoxal
  type: gocam:Object
- id: GO:0004733
  label: pyridoxamine phosphate oxidase activity
  type: gocam:Object
- id: PomBase:SPAC1093.02
  label: pdx3 Spom
  type: gocam:Object
- id: GO:0008615
  label: pyridoxine biosynthetic process
  type: gocam:Object
- id: ECO:0000501
  label: evidence used in automatic assertion
  type: gocam:Object
- id: CHEBI:58451
  label: pyridoxamine 5'-phosphate(1-)
  type: gocam:Object
- id: GO:0042818
  label: pyridoxamine metabolic process
  type: gocam:Object
- id: ECO:0000305
  label: curator inference used in manual assertion
  type: gocam:Object
- id: GO:0036381
  label: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
  type: gocam:Object
- id: PomBase:SPAC29B12.04
  label: snz1 Spom
  type: gocam:Object
- id: GO:0042823
  label: pyridoxal 5'-phosphate biosynthetic process
  type: gocam:Object
- id: ECO:0000266
  label: sequence orthology evidence used in manual assertion
  type: gocam:Object
- id: ECO:0000316
  label: genetic interaction evidence used in manual assertion
  type: gocam:Object
- id: GO:0004359
  label: glutaminase activity
  type: gocam:Object
- id: PomBase:SPAC222.08c
  label: sno1 Spom
  type: gocam:Object
- id: GO:0005829
  label: cytosol
  type: gocam:Object
- id: GO:0005737
  label: cytoplasm
  type: gocam:Object
- id: ECO:0007005
  label: high throughput direct assay evidence used in manual assertion
  type: gocam:Object
- id: CHEBI:16240
  label: hydrogen peroxide
  type: gocam:Object
- id: CHEBI:28938
  label: ammonium
  type: gocam:Object
- id: CHEBI:58589
  label: pyridoxine 5'-phosphate(2-)
  type: gocam:Object
- id: CHEBI:58359
  label: L-glutamine zwitterion
  type: gocam:Object
- id: CHEBI:59776
  label: D-glyceraldehyde 3-phosphate(2-)
  type: gocam:Object
- id: CHEBI:58273
  label: aldehydo-D-ribose 5-phosphate(2-)
  type: gocam:Object
- id: CHEBI:43474
  label: hydrogenphosphate
  type: gocam:Object
- id: CHEBI:29985
  label: L-glutamate(1-)
  type: gocam:Object
provenances:
- contributor:
  - https://orcid.org/0000-0001-6330-7526
  - https://orcid.org/0009-0003-9059-1333
  date: '2026-03-09'
  provided_by:
  - http://www.pombase.org
