PomBase home

protein coding gene - zpr1 (SPAC15A10.04c) - EF-1 alpha folding chaperone, zinc finger protein Zpr1

Gene summary

Standard name
zpr1
Systematic ID
SPAC15A10.04c
Product
EF-1 alpha folding chaperone, zinc finger protein Zpr1
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
O13724
ORFeome ID
21/21D05
Characterisation status
biological role inferred
Feature type
mRNA gene
Genomic location
chromosome I: 3683597..3685365 reverse strand

Annotation

Disease association

MONDO:0859146 - growth restriction, hypoplastic kidneys, alopecia, and distinctive facies

References:

GO biological process

GO:0006458 - 'de novo' protein folding

References:

GO cellular component

GO:0005829 - cytosol

References:

GO:0005634 - nucleus

References:

GO molecular function

GO:0044183 - protein folding chaperone

References:

GO:0061770 - translation elongation factor binding

References:

GO:0008270 - zinc ion binding

References:

Modification

MOD:00047 - O-phospho-L-threonine

References:

MOD:01149 - sumoylated lysine

References:

MOD:01148 - ubiquitinylated lysine

References:

Protein features

PBO:0111743 - zinc finger protein

Qualitative gene expression

PomGeneEx:0000019 - protein level decreased

References:

PomGeneEx:0000012 - RNA level decreased

References:

PomGeneEx:0000011 - RNA level increased

References:

Quantitative gene expression

PBO:0006310 - protein level

References:

PBO:0011963 - RNA level

References:

Single locus phenotype

FYPO:0001991 - inviable after spore germination, without cell division

References:

Genotypes:

FYPO:0002151 - inviable spore

References:

Genotypes:

FYPO:0002061 - inviable vegetative cell population

References:

Genotypes:

FYPO:0001511 - inviable vegetative cell, abnormal cell shape, normal cell size

References:

Genotypes:

Taxonomic conservation

PBO:0011072 - conserved in archaea

PBO:0011065 - conserved in eukaryotes

PBO:0011064 - conserved in fungi

PBO:0011069 - conserved in metazoa

PBO:0011070 - conserved in vertebrates

PBO:0006222 - predominantly single copy (one to one)

Protein features

IDNameInterPro nameDB name
PF03367Zn_ribbon_ZPR1Znf_ZPR1PFAM
PF22794jr-ZPR1ZPR1_jr_domPFAM
SM00709zpr1Znf_ZPR1SMART
G3DSA:2.20.25.420:FF:000002FUNFAM
G3DSA:2.20.25.420:FF:000001FUNFAM
G3DSA:2.60.120.1040:FF:000003FUNFAM
G3DSA:2.60.120.1040:FF:000001FUNFAM
G3DSA:2.20.25.420ZPR1, zinc finger domainZPR1_Znf1/2GENE3D
G3DSA:2.60.120.1040ZPR1, A/B domainZPR1_A/B_domGENE3D
PTHR10876ZINC FINGER PROTEIN ZPR1ZPR1PANTHER
TIGR00310ZPR1_znfZnf_ZPR1NCBIFAM

Orthologs

References / Literature

PMID:30726745 - Fission Yeast NDR/LATS Kinase Orb6 Regulates Exocytosis via Phosphorylation of the Exocyst Complex.
Tay YD et al. Cell Rep 2019 Feb 05;26(6):1654-1667.e7
GO_REF:0000033 - Annotation inferences using phylogenetic trees
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:39367033 - Quantitative proteomics and phosphoproteomics profiling of meiotic divisions in the fission yeast Schizosaccharomyces pombe.
Sivakova B et al. Sci Rep 2024 Oct 04;14(1):23105
PMID:16823372 - ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.
Matsuyama A et al. Nat Biotechnol 2006 Jul;24(7):841-7
PB_REF:0000006 - Disease associations from Monarch via human-pombe orthologs
PMID:26537787 - Targeting of SUMO substrates to a Cdc48-Ufd1-Npl4 segregase and STUbL pathway in fission yeast.
Køhler JB et al. Nat Commun 2015 Nov 05;6:8827
PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PMID:39705284 - Proteomic and phosphoproteomic analyses reveal that TORC1 is reactivated by pheromone signaling during sexual reproduction in fission yeast.
Bérard M et al. PLoS Biol 2024 Dec 20;22(12):e3002963
PMID:29432178 - General amino acid control in fission yeast is regulated by a nonconserved transcription factor, with functions analogous to Gcn4/Atf4.
Duncan CDS et al. Proc Natl Acad Sci U S A 2018 Feb 20;115(8):E1829-E1838
PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053
PMID:37597513 - A Zpr1 co-chaperone mediates folding of eukaryotic translation elongation factor 1A via a GTPase cycle.
McQuown AJ et al. Mol Cell 2023 Sep 07;83(17):3108-3122.e13
GO_REF:0000002 - Comments
PMID:25375137 - Systematic analysis of the role of RNA-binding proteins in the regulation of RNA stability.
Hasan A et al. PLoS Genet 2014 Nov;10(11):e1004684
PMID:24763107 - Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).
Carpy A et al. Mol Cell Proteomics 2014 Aug;13(8):1925-36
PMID:33313903 - Ribosome profiling reveals ribosome stalling on tryptophan codons and ribosome queuing upon oxidative stress in fission yeast.
Rubio A et al. Nucleic Acids Res 2021 Jan 11;49(1):383-399
PMID:16537923 - Sterol regulatory element binding protein is a principal regulator of anaerobic gene expression in fission yeast.
Todd BL et al. Mol Cell Biol 2006 Apr;26(7):2817-31
PMID:36630955 - Zinc-finger protein Zpr1 is a bespoke chaperone essential for eEF1A biogenesis.
Sabbarini IM et al. Mol Cell 2023 Jan 19;83(2):252-265.e13
PMID:37970674 - SUMOylation regulates Lem2 function in centromere clustering and silencing.
Strachan J et al. J Cell Sci 2023 Dec 01;136(23)