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protein coding gene - bub3 (SPAC23H3.08c) - mitotic spindle checkpoint WD repeat protein Bub3

Gene summary

Standard name
bub3
Systematic ID
SPAC23H3.08c
Product
mitotic spindle checkpoint WD repeat protein Bub3
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
O42860
ORFeome ID
14/14H04
Characterisation status
biological role published
Feature type
mRNA gene
Genomic location
chromosome I: 2506085..2507369 reverse strand

Annotation

PBO:0000285 - Mad2-dependent checkpoint response

GO biological process

GO:1990942 - mitotic metaphase chromosome recapture

References:

GO:1990758 - mitotic sister chromatid biorientation

References:

GO:0140499 - negative regulation of mitotic spindle assembly checkpoint signaling

References:

GO:0090266 - regulation of mitotic cell cycle spindle assembly checkpoint

References:

GO cellular component

GO:1990298 - bub1-bub3 complex

References:

GO:0000776 - kinetochore

References:

GO:0005654 - nucleoplasm

References:

GO:0005634 - nucleus

References:

GO molecular function

GO:0043130 - ubiquitin binding

References:

Modification

MOD:00048 - O4'-phospho-L-tyrosine

References:

Multi-locus phenotype

FYPO:0000030 - abnormal mitotic chromosome congression

References:

Genotypes:

FYPO:0000168 - abnormal mitotic spindle assembly checkpoint

References:

Genotypes:

FYPO:0004318 - abolished mitotic spindle assembly checkpoint

References:

Genotypes:

FYPO:0000229 - cut

References:

Genotypes:

FYPO:0005781 - decreased duration of mitotic spindle assembly checkpoint

References:

Genotypes:

FYPO:0001645 - decreased protein-protein interaction

References:

Genotypes:

FYPO:0005780 - decreased response to mitotic spindle assembly checkpoint signaling

References:

Genotypes:

FYPO:0002638 - increased activation of mitotic spindle assembly checkpoint

References:

Genotypes:

FYPO:0005684 - increased duration of mitotic prometaphase

References:

Genotypes:

FYPO:0002061 - inviable vegetative cell population

References:

Genotypes:

FYPO:0000324 - mitotic metaphase/anaphase transition delay

References:

Genotypes:

FYPO:0007399 - normal protein localization to kinetochore during mitotic interphase

References:

Genotypes:

FYPO:0000703 - normal protein-protein interaction

References:

Genotypes:

FYPO:0007438 - premature activation of mitotic spindle assembly checkpoint

References:

Genotypes:

FYPO:0001234 - slow vegetative cell population growth

References:

Genotypes:

FYPO:0003241 - unequal mitotic sister chromatid segregation

References:

Genotypes:

FYPO:0002060 - viable vegetative cell population

References:

Genotypes:

Protein features

PBO:0111751 - WD repeat protein

Quantitative gene expression

PBO:0006310 - protein level

References:

PBO:0011963 - RNA level

References:

Single locus phenotype

FYPO:0000326 - abnormal mitotic sister chromatid biorientation

References:

Genotypes:

FYPO:0000141 - abnormal mitotic sister chromatid segregation

References:

Genotypes:

FYPO:0008164 - abnormal protein localization to kinetochore during mitotic M phase

References:

Genotypes:

FYPO:0004318 - abolished mitotic spindle assembly checkpoint

References:

Genotypes:

FYPO:0008166 - abolished protein localization to kinetochore during mitotic prometaphase

References:

Genotypes:

FYPO:0007383 - abolished protein localization to kinetochore during mitotic spindle assembly checkpoint signaling

References:

Genotypes:

FYPO:0001269 - abolished protein localization to kinetochore during vegetative growth

References:

Genotypes:

FYPO:0005781 - decreased duration of mitotic spindle assembly checkpoint

References:

Genotypes:

FYPO:0001324 - decreased protein level during vegetative growth

References:

Genotypes:

FYPO:0007244 - decreased protein localization to kinetochore during mitotic metaphase

References:

Genotypes:

FYPO:0005780 - decreased response to mitotic spindle assembly checkpoint signaling

References:

Genotypes:

FYPO:0008202 - equational sister chromatid separation at meiosis I

References:

Genotypes:

FYPO:0005684 - increased duration of mitotic prometaphase

References:

Genotypes:

FYPO:0000786 - increased plasmid loss

References:

Genotypes:

FYPO:0000228 - lagging mitotic chromosomes

References:

Genotypes:

FYPO:0000245 - loss of viability in stationary phase

References:

Genotypes:

FYPO:0001839 - normal minichromosome loss

References:

Genotypes:

FYPO:0003762 - normal mitotic spindle assembly checkpoint

References:

Genotypes:

FYPO:0004396 - normal mitotic spindle elongation

References:

Genotypes:

FYPO:0007399 - normal protein localization to kinetochore during mitotic interphase

References:

Genotypes:

FYPO:0005212 - normal protein localization to kinetochore during mitotic prometaphase

References:

Genotypes:

FYPO:0004828 - normal protein localization to nucleus during mitosis

References:

Genotypes:

FYPO:0000703 - normal protein-protein interaction

References:

Genotypes:

FYPO:0000764 - resistance to cycloheximide

References:

Genotypes:

FYPO:0009038 - resistance to egtazic acid

References:

Genotypes:

FYPO:0001034 - resistance to tunicamycin

References:

Genotypes:

FYPO:0004434 - sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide

References:

Genotypes:

FYPO:0000842 - sensitive to ethanol during vegetative growth

References:

Genotypes:

FYPO:0000785 - sensitive to formamide

References:

Genotypes:

FYPO:0000091 - sensitive to thiabendazole

References:

Genotypes:

FYPO:0004435 - sensitive to tingenone

References:

Genotypes:

FYPO:0005633 - sister kinetochore dissociation in meiotic metaphase I, normal chromosome segregation in meiosis I, and sister chromatid non-disjunction in meiosis II

References:

Genotypes:

FYPO:0003241 - unequal mitotic sister chromatid segregation

References:

Genotypes:

FYPO:0005069 - unequal mitotic sister chromatid segregation following normal mitosis

References:

Genotypes:

FYPO:0002060 - viable vegetative cell population

References:

Genotypes:

FYPO:0002177 - viable vegetative cell with normal cell morphology

References:

Genotypes:

Taxonomic conservation

PBO:0011065 - conserved in eukaryotes

PBO:0011071 - conserved in eukaryotes only

PBO:0011064 - conserved in fungi

PBO:0011069 - conserved in metazoa

PBO:0011070 - conserved in vertebrates

PBO:0006222 - predominantly single copy (one to one)

Protein features

IDNameInterPro nameDB name
PF00400WD40WD40_rptPFAM
PS00678WD_REPEATS_1WD40_repeat_CSPROSITE_PATTERNS
PS50082WD_REPEATS_2WD40_rptPROSITE_PROFILES
SM00320WD40_4WD40_rptSMART
SSF50978WD40 repeat-likeWD40_repeat_dom_sfSUPERFAMILY
G3DSA:2.130.10.10WD40/YVTN_repeat-like_dom_sfGENE3D
PTHR10971MRNA EXPORT FACTOR AND BUB3PANTHER

Orthologs

References / Literature

PMID:24763107 - Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).
Carpy A et al. Mol Cell Proteomics 2014 Aug;13(8):1925-36
PMID:26900649 - The hairpin region of Ndc80 is important for the kinetochore recruitment of Mph1/MPS1 in fission yeast.
Chmielewska AE et al. Cell Cycle 2016;15(5):740-7
PMID:28178520 - Identification of a Sgo2-Dependent but Mad2-Independent Pathway Controlling Anaphase Onset in Fission Yeast.
Meadows JC et al. Cell Rep 2017 Feb 07;18(6):1422-1433
PMID:28366743 - Different Functionality of Cdc20 Binding Sites within the Mitotic Checkpoint Complex.
Sewart K et al. Curr Biol 2017 Apr 24;27(8):1213-1220
PMID:29440310 - Asp1 Bifunctional Activity Modulates Spindle Function via Controlling Cellular Inositol Pyrophosphate Levels in Schizosaccharomyces pombe.
Pascual-Ortiz M et al. Mol Cell Biol 2018 May 01;38(9)
PMID:25253718 - csi2p modulates microtubule dynamics and organizes the bipolar spindle for chromosome segregation.
Costa J et al. Mol Biol Cell 2014 Dec 01;25(24):3900-8
PMID:27618268 - Bub3-Bub1 Binding to Spc7/KNL1 Toggles the Spindle Checkpoint Switch by Licensing the Interaction of Bub1 with Mad1-Mad2.
Mora-Santos MD et al. Curr Biol 2016 Oct 10;26(19):2642-2650
PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PMID:24477934 - Mad1 contribution to spindle assembly checkpoint signalling goes beyond presenting Mad2 at kinetochores.
Heinrich S et al. EMBO Rep 2014 Mar;15(3):291-8
PMID:18818364 - Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast.
Roguev A et al. Science 2008 Oct 17;322(5900):405-10
PMID:31257143 - The Bub1-TPR Domain Interacts Directly with Mad3 to Generate Robust Spindle Checkpoint Arrest.
Leontiou I et al. Curr Biol 2019 Jul 22;29(14):2407-2414.e7
PMID:16360688 - Control of Shugoshin function during fission-yeast meiosis.
Vaur S et al. Curr Biol 2005 Dec 20;15(24):2263-70
PMID:20537132 - Global fitness profiling of fission yeast deletion strains by barcode sequencing.
Han TX et al. Genome Biol 2010;11(6):R60
PMID:34250083 - Barcode sequencing and a high-throughput assay for chronological lifespan uncover ageing-associated genes in fission yeast.
Romila CA et al. Microb Cell 2021 Jul 05;8(7):146-160
PMID:19547744 - Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species.
Beltrao P et al. PLoS Biol 2009 Jun 16;7(6):e1000134
PMID:24161933 - Determinants of robustness in spindle assembly checkpoint signalling.
Heinrich S et al. Nat Cell Biol 2013 Nov;15(11):1328-39
PMID:28017606 - Generation of a Spindle Checkpoint Arrest from Synthetic Signaling Assemblies.
Yuan I et al. Curr Biol 2017 Jan 09;27(1):137-143
PMID:11909965 - Fission yeast Mad3p is required for Mad2p to inhibit the anaphase-promoting complex and localizes to kinetochores in a Bub1p-, Bub3p-, and Mph1p-dependent manner.
Millband DN et al. Mol Cell Biol 2002 Apr;22(8):2728-42
PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:40015273 - A comprehensive Schizosaccharomyces pombe atlas of physical transcription factor interactions with proteins and chromatin.
Skribbe M et al. Mol Cell 2025 Feb 19;
PMID:37787768 - Broad functional profiling of fission yeast proteins using phenomics and machine learning.
Rodríguez-López M et al. Elife 2023 Oct 03;12
PMID:15509783 - Kinetochore targeting of fission yeast Mad and Bub proteins is essential for spindle checkpoint function but not for all chromosome segregation roles of Bub1p.
Vanoosthuyse V et al. Mol Cell Biol 2004 Nov;24(22):9786-801
PMID:16394105 - The V260I mutation in fission yeast alpha-tubulin Atb2 affects microtubule dynamics and EB1-Mal3 localization and activates the Bub1 branch of the spindle checkpoint.
Asakawa K et al. Mol Biol Cell 2006 Mar;17(3):1421-35
PMID:22521786 - Phosphodependent recruitment of Bub1 and Bub3 to Spc7/KNL1 by Mph1 kinase maintains the spindle checkpoint.
Shepperd LA et al. Curr Biol 2012 May 22;22(10):891-9
PMID:28497540 - Meikin-associated polo-like kinase specifies Bub1 distribution in meiosis I.
Miyazaki S et al. Genes Cells 2017 Jun;22(6):552-567
PMID:21664573 - Spindle checkpoint silencing requires association of PP1 to both Spc7 and kinesin-8 motors.
Meadows JC et al. Dev Cell 2011 Jun 14;20(6):739-50
PMID:26258632 - Mad1 promotes chromosome congression by anchoring a kinesin motor to the kinetochore.
Akera T et al. Nat Cell Biol 2015 Sep;17(9):1124-33
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:12719471 - Sim4: a novel fission yeast kinetochore protein required for centromeric silencing and chromosome segregation.
Pidoux AL et al. J Cell Biol 2003 Apr 28;161(2):295-307
PMID:22184248 - Centromere-tethered Mps1 pombe homolog (Mph1) kinase is a sufficient marker for recruitment of the spindle checkpoint protein Bub1, but not Mad1.
Ito D et al. Proc Natl Acad Sci U S A 2012 Jan 03;109(1):209-14
PMID:22825872 - Mph1 kinetochore localization is crucial and upstream in the hierarchy of spindle assembly checkpoint protein recruitment to kinetochores.
Heinrich S et al. J Cell Sci 2012 Oct 15;125(Pt 20):4720-7
PMID:15525673 - The A78V mutation in the Mad3-like domain of Schizosaccharomyces pombe Bub1p perturbs nuclear accumulation and kinetochore targeting of Bub1p, Bub3p, and Mad3p and spindle assembly checkpoint function.
Kadura S et al. Mol Biol Cell 2005 Jan;16(1):385-95
PMID:16179942 - Mal3, the fission yeast EB1 homologue, cooperates with Bub1 spindle checkpoint to prevent monopolar attachment.
Asakawa K et al. EMBO Rep 2005 Dec;6(12):1194-200
PMID:18204818 - Identification of small molecules inducing apoptosis by cell-based assay using fission yeast deletion mutants.
Chung KS et al. Invest New Drugs 2008 Aug;26(4):299-307
PMID:19846658 - Bub3p facilitates spindle checkpoint silencing in fission yeast.
Vanoosthuyse V et al. Mol Biol Cell 2009 Dec;20(24):5096-105
PMID:18562692 - Latrunculin A delays anaphase onset in fission yeast by disrupting an Ase1-independent pathway controlling mitotic spindle stability.
Meadows JC et al. Mol Biol Cell 2008 Sep;19(9):3713-23
GO_REF:0000033 - Annotation inferences using phylogenetic trees
PMID:22437499 - Structure of the mitotic checkpoint complex.
Chao WC et al. Nature 2012 Mar 21;484(7393):208-13
PMID:22660415 - MPS1/Mph1 phosphorylates the kinetochore protein KNL1/Spc7 to recruit SAC components.
Yamagishi Y et al. Nat Cell Biol 2012 Jun 03;14(7):746-52
PMID:23297348 - Comprehensive proteomics analysis reveals new substrates and regulators of the fission yeast clp1/cdc14 phosphatase.
Chen JS et al. Mol Cell Proteomics 2013 May;12(5):1074-86
PMID:19680287 - Bub1 and Bub3 promote the conversion from monopolar to bipolar chromosome attachment independently of shugoshin.
Windecker H et al. EMBO Rep 2009 Sep;10(9):1022-8
PMID:22681890 - Hierarchical modularity and the evolution of genetic interactomes across species.
Ryan CJ et al. Mol Cell 2012 Jun 08;46(5):691-704
PMID:25472718 - Alp7/TACC recruits kinesin-8-PP1 to the Ndc80 kinetochore protein for timely mitotic progression and chromosome movement.
Tang NH et al. J Cell Sci 2015 Jan 15;128(2):354-63
PMID:15483052 - BAF53/Arp4 homolog Alp5 in fission yeast is required for histone H4 acetylation, kinetochore-spindle attachment, and gene silencing at centromere.
Minoda A et al. Mol Biol Cell 2005 Jan;16(1):316-27
PMID:24583014 - Slow checkpoint activation kinetics as a safety device in anaphase.
Kamenz J et al. Curr Biol 2014 Mar 17;24(6):646-51