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protein coding gene - mrp17 (SPAC343.08c) - mitochondrial ribosomal protein subunit S6

Gene summary

Standard name
mrp17
Systematic ID
SPAC343.08c
Product
mitochondrial ribosomal protein subunit S6
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
Q9UT82
ORFeome ID
04/04G08
Characterisation status
biological role inferred
Feature type
mRNA gene
Genomic location
chromosome I: 1650923..1653856 reverse strand

Annotation

GO biological process

GO:0032543 - mitochondrial translation

References:

GO cellular component

GO:0005763 - mitochondrial small ribosomal subunit

References:

GO:0005739 - mitochondrion

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GO molecular function

GO:0070181 - small ribosomal subunit rRNA binding

References:

GO:0003735 - structural constituent of ribosome

References:

Quantitative gene expression

PBO:0006310 - protein level

References:

PBO:0011963 - RNA level

References:

Single locus phenotype

FYPO:0004481 - abolished cell population growth at high temperature

References:

Genotypes:

FYPO:0003743 - decreased cell population growth during glucose starvation

References:

Genotypes:

FYPO:0002111 - inviable tapered vegetative cell

References:

Genotypes:

FYPO:0002061 - inviable vegetative cell population

References:

Genotypes:

FYPO:0002199 - inviable vegetative cell with normal cell morphology

References:

Genotypes:

FYPO:0006660 - loss of viability upon G0 to G1 transition

References:

Genotypes:

FYPO:0003896 - normal mitochondrial morphology

References:

Genotypes:

Taxonomic conservation

PBO:0011067 - conserved in bacteria

PBO:0011065 - conserved in eukaryotes

PBO:0011064 - conserved in fungi

PBO:0011069 - conserved in metazoa

PBO:0011070 - conserved in vertebrates

PBO:0006222 - predominantly single copy (one to one)

Warnings

PBO:0000070 - gene structure updated

References:

Protein features

IDNameInterPro nameDB name
PF01250Ribosomal_S6Ribosomal_bS6Pfam
cd15465bS6_mitoCDD
G3DSA:3.30.70.60:FF:000007CATH-FunFam
G3DSA:3.30.70.60Transl_elong_EF1B/ribsomal_bS6CATH-Gene3D
SSF54995Ribosomal_bS6_sfSUPERFAMILY
PTHR21011Ribosomal_bS6PANTHER
TIGR00166S6Ribosomal_bS6NCBIFAM
MF_00360Ribosomal_bS6Ribosomal_S6_plastid/chlptHAMAP

Orthologs

References / Literature

PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053
PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:26771498 - A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human.
Vo TV et al. Cell 2016 Jan 14;164(1-2):310-323
GO_REF:0000024 - Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity.
PMID:33823662 - Multiple nutritional phenotypes of fission yeast mutants defective in genes encoding essential mitochondrial proteins.
Uehara L et al. Open Biol 2021 Apr;11(4):200369
PMID:24763107 - Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).
Carpy A et al. Mol Cell Proteomics 2014 Aug;13(8):1925-36
PMID:16823372 - ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.
Matsuyama A et al. Nat Biotechnol 2006 Jul;24(7):841-7
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
GO_REF:0000033 - Annotation inferences using phylogenetic trees