PomBase home

protein coding gene - gem6 (SPAC4D7.15) - SMN complex subunit Gem6

Gene summary

Standard name
gem6
Systematic ID
SPAC4D7.15
Product
SMN complex subunit Gem6
Organism
Schizosaccharomyces pombe (fission yeast)
Synonyms
new12
UniProt ID
G2TRK8
Characterisation status
biological role published
Feature type
mRNA gene
Genomic location
chromosome I: 5353938..5354313 reverse strand

Annotation

GO biological process

GO:0000387 - spliceosomal snRNP assembly

References:

GO cellular component

GO:0032797 - SMN complex

References:

GO molecular function

GO:0003723 - RNA binding

References:

Quantitative gene expression

PBO:0011963 - RNA level

References:

Single locus phenotype

FYPO:0002059 - inviable cell population

References:

Genotypes:

Taxonomic conservation

PBO:0011065 - conserved in eukaryotes

PBO:0011071 - conserved in eukaryotes only

PBO:0011064 - conserved in fungi

PBO:0011069 - conserved in metazoa

PBO:0011070 - conserved in vertebrates

PBO:0000055 - no apparent S. cerevisiae ortholog

PBO:0006222 - predominantly single copy (one to one)

Warnings

PBO:0000082 - new gene

References:

Protein features

IDNameInterPro nameDB name
PS52002SMSmPROSITE_PROFILES

Orthologs

References / Literature

PMID:21270388 - Augmented annotation of the Schizosaccharomyces pombe genome reveals additional genes required for growth and viability.
Bitton DA et al. Genetics 2011 Apr;187(4):1207-17
PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
GO_REF:0000002 - Comments
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:33754639 - Identification and structural analysis of the Schizosaccharomyces pombe SMN complex.
Veepaschit J et al. Nucleic Acids Res 2021 Jul 21;49(13):7207-7223