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protein coding gene - mst1 (SPAC637.12c) - histone acetyltransferase, KAT5 family Mst1

Gene summary

Standard name
mst1
Systematic ID
SPAC637.12c
Product
histone acetyltransferase, KAT5 family Mst1
Organism
Schizosaccharomyces pombe (fission yeast)
Synonyms
kat5
UniProt ID
O94446
ORFeome ID
21/21E06
Characterisation status
biological role published
Feature type
mRNA gene
Genomic location
chromosome I: 4559101..4562829 reverse strand

Annotation

Disease association

MONDO:0030852 - neurodevelopmental disorder with dysmorphic facies, sleep disturbance, and brain abnormalities

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GO biological process

GO:0140861 - DNA repair-dependent chromatin remodeling

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GO:0031453 - positive regulation of heterochromatin formation

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GO:0006357 - regulation of transcription by RNA polymerase II

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GO cellular component

GO:0035267 - NuA4 histone acetyltransferase complex

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GO:0005634 - nucleus

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GO:0005721 - pericentric heterochromatin

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GO:0035861 - site of double-strand break

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GO:0000812 - Swr1 complex

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GO molecular function

GO:0003682 - chromatin binding

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GO:0044016 - histone H3K4 acetyltransferase activity

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GO:0010485 - histone H4 acetyltransferase activity

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GO:0106226 - peptide 2-hydroxyisobutyryltransferase activity

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GO:0140065 - peptide butyryltransferase activity

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GO:0140064 - peptide crotonyltransferase activity

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GO:0005515 - protein binding

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GO:0034212 - protein N-acetyltransferase activity

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GO:0003712 - transcription coregulator activity

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Modification

MOD:00064 - N6-acetyl-L-lysine

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MOD:00046 - O-phospho-L-serine

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Multi-locus phenotype

FYPO:0006686 - decreased DNA double-strand break processing

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Genotypes:

FYPO:0008256 - decreased histone H3-K4 acetylation at LTR during vegetative growth

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Genotypes:

FYPO:0008255 - decreased histone H3-K4 acetylation at protein coding gene during vegetative growth

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Genotypes:

FYPO:0004516 - decreased number of Rad52 foci during vegetative growth

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Genotypes:

FYPO:0007710 - decreased number of Ssb1 foci

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Genotypes:

FYPO:0001355 - decreased vegetative cell population growth

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Genotypes:

FYPO:0004709 - increased number of Rad52 foci

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Genotypes:

FYPO:0000972 - increased number of Rad52 foci during vegetative growth

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Genotypes:

FYPO:0002573 - increased number of Ssb1 foci

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Genotypes:

FYPO:0002061 - inviable vegetative cell population

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Genotypes:

FYPO:0003906 - normal growth on bleomycin

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Genotypes:

FYPO:0001032 - resistance to camptothecin

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Genotypes:

FYPO:0000095 - sensitive to bleomycin

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Genotypes:

FYPO:0000085 - sensitive to camptothecin

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Genotypes:

FYPO:0000088 - sensitive to hydroxyurea

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Genotypes:

FYPO:0000089 - sensitive to methyl methanesulfonate

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Genotypes:

FYPO:0000268 - sensitive to UV during vegetative growth

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Genotypes:

Protein features

PBO:0111831 - chromodomain protein

Quantitative gene expression

PBO:0006310 - protein level

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PBO:0011963 - RNA level

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Single locus phenotype

FYPO:0002553 - abnormal double-strand break processing

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Genotypes:

FYPO:0000227 - chromosome loss during mitotic chromosome segregation

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Genotypes:

FYPO:0006686 - decreased DNA double-strand break processing

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Genotypes:

FYPO:0006687 - decreased DNA double-strand break processing during double-strand break repair via homologous recombination

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Genotypes:

FYPO:0000185 - decreased gene conversion during vegetative growth

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Genotypes:

FYPO:0000331 - decreased histone acetylation during vegetative growth

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Genotypes:

FYPO:0008256 - decreased histone H3-K4 acetylation at LTR during vegetative growth

References:

Genotypes:

FYPO:0008255 - decreased histone H3-K4 acetylation at protein coding gene during vegetative growth

References:

Genotypes:

FYPO:0004239 - decreased histone H3-K4 acetylation during vegetative growth

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Genotypes:

FYPO:0005011 - decreased histone H4 acetylation during vegetative growth

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Genotypes:

FYPO:0004516 - decreased number of Rad52 foci during vegetative growth

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Genotypes:

FYPO:0007710 - decreased number of Ssb1 foci

References:

Genotypes:

FYPO:0007255 - decreased replication fork processing

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Genotypes:

FYPO:0001355 - decreased vegetative cell population growth

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Genotypes:

FYPO:0000614 - increased duration of mitotic S phase

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Genotypes:

FYPO:0004466 - increased number of Rad52 foci during cellular response to camptothecin

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Genotypes:

FYPO:0005296 - increased number of Rad52 foci during mitotic S phase

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Genotypes:

FYPO:0000972 - increased number of Rad52 foci during vegetative growth

References:

Genotypes:

FYPO:0002573 - increased number of Ssb1 foci

References:

Genotypes:

FYPO:0002061 - inviable vegetative cell population

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Genotypes:

FYPO:0001511 - inviable vegetative cell, abnormal cell shape, normal cell size

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Genotypes:

FYPO:0000963 - normal growth on hydroxyurea

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Genotypes:

FYPO:0002601 - normal histone H2A phosphorylation during vegetative growth

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Genotypes:

FYPO:0007328 - normal number of Rad52 foci during vegetative growth

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Genotypes:

FYPO:0007711 - normal number of Ssb1 foci

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Genotypes:

FYPO:0004465 - normal protein phosphorylation during cellular response to camptothecin

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Genotypes:

FYPO:0002099 - normal protein phosphorylation during cellular response to hydroxyurea

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Genotypes:

FYPO:0005395 - normal protein phosphorylation during cellular response to methyl methanesulfonate

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Genotypes:

FYPO:0003503 - normal vegetative cell length

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Genotypes:

FYPO:0000095 - sensitive to bleomycin

References:

Genotypes:

FYPO:0000085 - sensitive to camptothecin

References:

Genotypes:

FYPO:0000088 - sensitive to hydroxyurea

References:

Genotypes:

FYPO:0000089 - sensitive to methyl methanesulfonate

References:

Genotypes:

FYPO:0002344 - sensitive to phleomycin

References:

Genotypes:

FYPO:0000268 - sensitive to UV during vegetative growth

References:

Genotypes:

Taxonomic conservation

PBO:0011065 - conserved in eukaryotes

PBO:0011071 - conserved in eukaryotes only

PBO:0011064 - conserved in fungi

PBO:0011069 - conserved in metazoa

PBO:0011070 - conserved in vertebrates

PBO:0006222 - predominantly single copy (one to one)

Protein features

IDNameInterPro nameDB name
PF17772zf-MYSTZf-MYSTPFAM
PF11717Tudor-knotTudor-knotPFAM
PF01853MOZ_SASHAT_MYST-typePFAM
cd04301NAT_SFCDD
PS51726MYST_HATHAT_MYST-typePROSITE_PROFILES
SM00298chromo_7Chromo/chromo_shadow_domSMART
G3DSA:3.40.630.30:FF:000002FUNFAM
G3DSA:1.10.10.10:FF:000022FUNFAM
G3DSA:3.30.60.60:FF:000001FUNFAM
SSF55729Acyl-CoA N-acyltransferases (Nat)Acyl_CoA_acyltransferaseSUPERFAMILY
SSF54160Chromo domain-likeChromo-like_dom_sfSUPERFAMILY
G3DSA:3.40.630.30GENE3D
G3DSA:3.30.60.60GENE3D
G3DSA:2.30.30.140GENE3D
G3DSA:1.10.10.10WH-like_DNA-bd_sfGENE3D
PTHR10615HISTONE ACETYLTRANSFERASEMYST_HATPANTHER
mobidb-lite-Disorderdisorder_predictionMOBIDB-Disorder
mobidb-lite-Low-complexitydisorder_predictionMOBIDB-Low-complexity
mobidb-lite-Positive-Polyelectrolytedisorder_predictionMOBIDB-Positive-Polyelectrolyte

Orthologs

References / Literature

PMID:36408920 - UniProt: the Universal Protein Knowledgebase in 2023.
UniProt Consortium Nucleic Acids Res 2023 Jan 06;51(D1):D523-D531
GO_REF:0000116 - Automatic Gene Ontology annotation based on Rhea mapping.
PMID:23695164 - Cross-species protein interactome mapping reveals species-specific wiring of stress response pathways.
Das J et al. Sci Signal 2013 May 21;6(276):ra38
PMID:29192674 - Landscape of the regulatory elements for lysine 2-hydroxyisobutyrylation pathway.
Huang H et al. Cell Res 2018 Jan;28(1):111-125
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053
PMID:20299455 - The fission yeast inhibitor of growth (ING) protein Png1p functions in response to DNA damage.
Chen JQ et al. J Biol Chem 2010 May 21;285(21):15786-93
PMID:30992049 - The NuA4 acetyltransferase and histone H4 acetylation promote replication recovery after topoisomerase I-poisoning.
Noguchi C et al. Epigenetics Chromatin 2019 Apr 16;12(1):24
PMID:20299449 - A chromodomain switch mediated by histone H3 Lys 4 acetylation regulates heterochromatin assembly.
Xhemalce B et al. Genes Dev 2010 Apr 01;24(7):647-52
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:25972440 - Global regulation of heterochromatin spreading by Leo1.
Verrier L et al. Open Biol 2015 May;5(5)
PMID:19915592 - An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe.
Kim HS et al. Nat Struct Mol Biol 2009 Dec;16(12):1286-93
PMID:19040720 - Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment.
Shevchenko A et al. Genome Biol 2008;9(11):R167
PMID:15483052 - BAF53/Arp4 homolog Alp5 in fission yeast is required for histone H4 acetylation, kinetochore-spindle attachment, and gene silencing at centromere.
Minoda A et al. Mol Biol Cell 2005 Jan;16(1):316-27
PMID:18505873 - Schizosaccharomyces pombe histone acetyltransferase Mst1 (KAT5) is an essential protein required for damage response and chromosome segregation.
Gómez EB et al. Genetics 2008 Jun;179(2):757-71
PMID:21642955 - Tra1 has specific regulatory roles, rather than global functions, within the SAGA co-activator complex.
Helmlinger D et al. EMBO J 2011 Jun 03;30(14):2843-52
PMID:26771498 - A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human.
Vo TV et al. Cell 2016 Jan 14;164(1-2):310-323
PMID:30726745 - Fission Yeast NDR/LATS Kinase Orb6 Regulates Exocytosis via Phosphorylation of the Exocyst Complex.
Tay YD et al. Cell Rep 2019 Feb 05;26(6):1654-1667.e7
GO_REF:0000033 - Annotation inferences using phylogenetic trees
PMID:24763107 - Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).
Carpy A et al. Mol Cell Proteomics 2014 Aug;13(8):1925-36
PB_REF:0000006 - Disease associations from Monarch via human-pombe orthologs
PMID:22095079 - The double-bromodomain proteins Bdf1 and Bdf2 modulate chromatin structure to regulate S-phase stress response in Schizosaccharomyces pombe.
Garabedian MV et al. Genetics 2012 Feb;190(2):487-500
PMID:31748520 - Chaperone-mediated ordered assembly of the SAGA and NuA4 transcription co-activator complexes in yeast.
Elías-Villalobos A et al. Nat Commun 2019 Nov 20;10(1):5237
GO_REF:0000024 - Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity.
PMID:16823372 - ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.
Matsuyama A et al. Nat Biotechnol 2006 Jul;24(7):841-7
PMID:25356590 - Multifaceted genome control by Set1 Dependent and Independent of H3K4 methylation and the Set1C/COMPASS complex.
Mikheyeva IV et al. PLoS Genet 2014 Oct;10(10):e1004740
PMID:29996109 - Quantitative Phosphoproteomics Reveals the Signaling Dynamics of Cell-Cycle Kinases in the Fission Yeast Schizosaccharomyces pombe.
Swaffer MP et al. Cell Rep 2018 Jul 10;24(2):503-514
PMID:33723569 - Schizosaccharomyces pombe KAT5 contributes to resection and repair of a DNA double-strand break.
Li T et al. Genetics 2021 May 17;218(1)
PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:35157728 - TOR complex 2 contributes to regulation of gene expression via inhibiting Gcn5 recruitment to subtelomeric and DNA replication stress genes.
Cohen A et al. PLoS Genet 2022 Feb;18(2):e1010061
PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PMID:23091701 - Impaired coenzyme A synthesis in fission yeast causes defective mitosis, quiescence-exit failure, histone hypoacetylation and fragile DNA.
Nakamura T et al. Open Biol 2012 Sep;2(9):120117
PMID:10759889 - Large-scale screening of intracellular protein localization in living fission yeast cells by the use of a GFP-fusion genomic DNA library.
Ding DQ et al. Genes Cells 2000 Mar;5(3):169-90