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protein coding gene - ftm3 (SPAC750.04c) - sub-telomeric 5Tm protein family Ftm3

Gene summary

Standard name
ftm3
Systematic ID
SPAC750.04c
Product
sub-telomeric 5Tm protein family Ftm3
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
P0CU06
Characterisation status
conserved unknown
Feature type
mRNA gene
Genomic location
chromosome I: 5564211..5564651 reverse strand

Annotation

Genome organisation

PBO:0000066 - telomeric duplication

Protein features

PBO:0111741 - sub-telomeric 5Tm protein family

Protein sequence feature

SO:0001812 - transmembrane_helix

References:

Qualitative gene expression

PomGeneEx:0000012 - RNA level decreased

References:

Quantitative gene expression

PBO:0011963 - RNA level

References:

Taxonomic conservation

PBO:0011065 - conserved in eukaryotes

PBO:0011064 - conserved in fungi

PBO:0011063 - conserved in fungi only

PBO:0000055 - no apparent S. cerevisiae ortholog

Protein features

IDNameInterPro nameDB name
PF09437Pombe_5TM5TM-prot_SCHPOPFAM

References / Literature

PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:22681890 - Hierarchical modularity and the evolution of genetic interactomes across species.
Ryan CJ et al. Mol Cell 2012 Jun 08;46(5):691-704
PMID:24463365 - Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth.
Rallis C et al. Biol Open 2014 Feb 15;3(2):161-71
PMID:11152613 - Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
Krogh A et al. J Mol Biol 2001 Jan 19;305(3):567-80
PMID:34460892 - Transcriptome sequencing and screening of genes related to glucose availability in Schizosaccharomyces pombe by RNA-seq analysis.
Tarhan Ç et al. Genet Mol Biol 2021;44(3):e20200245