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protein coding gene - cdc24 (SPAC8F11.07c) - DNA replication protein Cdc24

Gene summary

Standard name
cdc24
Systematic ID
SPAC8F11.07c
Product
DNA replication protein Cdc24
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
O75004
ORFeome ID
33/33E03
Characterisation status
biological role published
Feature type
mRNA gene
Genomic location
chromosome I: 2863730..2865826 reverse strand

Annotation

GO biological process

GO:0000724 - double-strand break repair via homologous recombination

References:

GO:1903461 - Okazaki fragment processing involved in mitotic DNA replication

References:

GO cellular component

GO:0032153 - cell division site

References:

GO:0005737 - cytoplasm

References:

GO:0005829 - cytosol

References:

GO:0043596 - nuclear replication fork

References:

GO:0005654 - nucleoplasm

References:

GO:0005634 - nucleus

References:

GO:0035861 - site of double-strand break

References:

GO molecular function

GO:0005515 - protein binding

References:

Multi-locus phenotype

FYPO:0001426 - abnormal negative regulation of mitotic DNA replication initiation resulting in partial rereplication

References:

Genotypes:

FYPO:0000229 - cut

References:

Genotypes:

FYPO:0003165 - cut with abnormal chromosome segregation

References:

Genotypes:

FYPO:0001514 - decreased protein localization to nucleus during vegetative growth

References:

Genotypes:

FYPO:0005786 - decreased spatial extent of double-strand break processing

References:

Genotypes:

FYPO:0001355 - decreased vegetative cell population growth

References:

Genotypes:

FYPO:0001490 - inviable elongated vegetative cell

References:

Genotypes:

FYPO:0002061 - inviable vegetative cell population

References:

Genotypes:

FYPO:0000838 - normal protein localization to nucleus during vegetative growth

References:

Genotypes:

FYPO:0001357 - normal vegetative cell population growth

References:

Genotypes:

FYPO:0000095 - sensitive to bleomycin

References:

Genotypes:

FYPO:0000085 - sensitive to camptothecin

References:

Genotypes:

FYPO:0002060 - viable vegetative cell population

References:

Genotypes:

Qualitative gene expression

PomGeneEx:0000016 - RNA level constant

References:

Quantitative gene expression

PBO:0006310 - protein level

References:

PBO:0011963 - RNA level

References:

Single locus phenotype

FYPO:0000611 - abnormal cell cycle arrest in mitotic S phase

References:

Genotypes:

FYPO:0000051 - abnormal meiosis

References:

Genotypes:

FYPO:0000059 - abnormal mitotic cell cycle

References:

Genotypes:

FYPO:0000444 - abnormal mitotic cell cycle arrest with replicated DNA

References:

Genotypes:

FYPO:0001343 - abnormal mitotic DNA replication

References:

Genotypes:

FYPO:0000481 - abnormal mitotic recombination

References:

Genotypes:

FYPO:0000705 - abolished protein-protein interaction

References:

Genotypes:

FYPO:0000227 - chromosome loss during mitotic chromosome segregation

References:

Genotypes:

FYPO:0000185 - decreased gene conversion during vegetative growth

References:

Genotypes:

FYPO:0003913 - decreased minichromosome loss during vegetative growth

References:

Genotypes:

FYPO:0002474 - decreased protein localization to double-strand break site

References:

Genotypes:

FYPO:0001645 - decreased protein-protein interaction

References:

Genotypes:

FYPO:0005786 - decreased spatial extent of double-strand break processing

References:

Genotypes:

FYPO:0000584 - decreased sporulation frequency

References:

Genotypes:

FYPO:0005773 - elongated mononucleate aseptate vegetative cell

References:

Genotypes:

FYPO:0000160 - fragmented DNA

References:

Genotypes:

FYPO:0005452 - increased break-induced loss of heterozygosity

References:

Genotypes:

FYPO:0003584 - increased double-strand break repair via nonhomologous end joining

References:

Genotypes:

FYPO:0000314 - inviable after spore germination with elongated germ tube

References:

Genotypes:

FYPO:0003529 - inviable after spore germination, multiple cell divisions, cell cycle arrest in mitotic interphase, elongated cells

References:

Genotypes:

FYPO:0002262 - inviable after spore germination, multiple cell divisions, elongated cell

References:

Genotypes:

FYPO:0001490 - inviable elongated vegetative cell

References:

Genotypes:

FYPO:0002061 - inviable vegetative cell population

References:

Genotypes:

FYPO:0003906 - normal growth on bleomycin

References:

Genotypes:

FYPO:0000963 - normal growth on hydroxyurea

References:

Genotypes:

FYPO:0000703 - normal protein-protein interaction

References:

Genotypes:

FYPO:0001357 - normal vegetative cell population growth

References:

Genotypes:

FYPO:0000085 - sensitive to camptothecin

References:

Genotypes:

FYPO:0002060 - viable vegetative cell population

References:

Genotypes:

Taxonomic conservation

PBO:0011065 - conserved in eukaryotes

References:

PBO:0011064 - conserved in fungi

References:

PBO:0000055 - no apparent S. cerevisiae ortholog

References:

Protein features

IDNameInterPro nameDB name
PF17246CDC24_OB1Cdc24_OB1PFAM
PF17245CDC24_OB2Cdc24_OB2PFAM
PF17244CDC24_OB3Cdc24_OB3PFAM

Orthologs

References / Literature

PMID:12409464 - The fission yeast pfh1(+) gene encodes an essential 5' to 3' DNA helicase required for the completion of S-phase.
Tanaka H et al. Nucleic Acids Res 2002 Nov 01;30(21):4728-39
PMID:15576681 - Genetics of lagging strand DNA synthesis and maturation in fission yeast: suppression analysis links the Dna2-Cdc24 complex to DNA polymerase delta.
Tanaka H et al. Nucleic Acids Res 2004;32(21):6367-77
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053
PMID:10880469 - Genetic analyses of Schizosaccharomyces pombe dna2(+) reveal that dna2 plays an essential role in Okazaki fragment metabolism.
Kang HY et al. Genetics 2000 Jul;155(3):1055-67
PMID:15302919 - Genetic and biochemical analyses of Pfh1 DNA helicase function in fission yeast.
Ryu GH et al. Nucleic Acids Res 2004;32(14):4205-16
PMID:12455694 - mcl1+, the Schizosaccharomyces pombe homologue of CTF4, is important for chromosome replication, cohesion, and segregation.
Williams DR et al. Eukaryot Cell 2002 Oct;1(5):758-73
PMID:16823372 - ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.
Matsuyama A et al. Nat Biotechnol 2006 Jul;24(7):841-7
PMID:10888871 - Mitotic replication initiation proteins are not required for pre-meiotic S phase.
Forsburg SL et al. Nat Genet 2000 Jul;25(3):263-8
PMID:11027263 - Schizosaccharomyces pombe Hsk1p is a potential cds1p target required for genome integrity.
Snaith HA et al. Mol Cell Biol 2000 Nov;20(21):7922-32
PMID:18667534 - Activation of the DNA damage checkpoint in mutants defective in DNA replication initiation.
Yin L et al. Mol Biol Cell 2008 Oct;19(10):4374-82
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:10628977 - Isolation and characterization of Nrf1p, a novel negative regulator of the Cdc42p GTPase in Schizosaccharomyces pombe.
Murray JM et al. Genetics 2000 Jan;154(1):155-65
PMID:9135148 - p56(chk1) protein kinase is required for the DNA replication checkpoint at 37 degrees C in fission yeast.
Francesconi S et al. EMBO J 1997 Mar 17;16(6):1332-41
PMID:9649516 - Fission yeast cdc24(+) encodes a novel replication factor required for chromosome integrity.
Gould KL et al. Genetics 1998 Jul;149(3):1221-33
PMID:9891039 - Fission yeast cdc24 is a replication factor C- and proliferating cell nuclear antigen-interacting factor essential for S-phase completion.
Tanaka H et al. Mol Cell Biol 1999 Feb;19(2):1038-48
PMID:25203555 - Fission yeast Pxd1 promotes proper DNA repair by activating Rad16XPF and inhibiting Dna2.
Zhang JM et al. PLoS Biol 2014 Sep;12(9):e1001946
PMID:23628481 - A proteome-wide visual screen identifies fission yeast proteins localizing to DNA double-strand breaks.
Yu Y et al. DNA Repair (Amst) 2013 Jun 01;12(6):433-43
PMID:9799358 - Cdm1, the smallest subunit of DNA polymerase d in the fission yeast Schizosaccharomyces pombe, is non-essential for growth and division.
Reynolds N et al. Curr Genet 1998 Oct;34(4):250-8
PMID:1934126 - Common genes and pathways in the regulation of the mitotic and meiotic cell cycles of Schizosaccharomyces pombe.
Grallert B et al. Curr Genet 1991 Aug;20(3):199-204
PMID:27729451 - Cdc24 Is Essential for Long-range End Resection in the Repair of Double-stranded DNA Breaks.
Zhang H et al. J Biol Chem 2016 Nov 25;291(48):24961-24973
Pfam:PF17244 - Unknown title
PMID:10388806 - Rereplication phenomenon in fission yeast requires MCM proteins and other S phase genes.
Snaith HA et al. Genetics 1999 Jul;152(3):839-51
PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PMID:6943408 - Cell division cycle mutants altered in DNA replication and mitosis in the fission yeast Schizosaccharomyces pombe.
Nasmyth K et al. Mol Gen Genet 1981;182(1):119-24
PMID:9154809 - A novel mutant allele of Schizosaccharomyces pombe rad26 defective in monitoring S-phase progression to prevent premature mitosis.
Uchiyama M et al. Mol Cell Biol 1997 Jun;17(6):3103-15
PMID:9928931 - The S/M checkpoint at 37 degrees C and the recovery of viability of the mutant poldeltats3 require the crb2+/rhp9+ gene in fission yeast.
Grenon M et al. Mol Gen Genet 1999 Jan;260(6):522-34