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protein coding gene - fbp1 (SPBC1198.14c) - fructose-1,6-bisphosphatase Fbp1

Gene summary

Standard name
fbp1
Systematic ID
SPBC1198.14c
Product
fructose-1,6-bisphosphatase Fbp1
Organism
Schizosaccharomyces pombe (fission yeast)
Synonyms
SPBC660.04c
UniProt ID
P09202
ORFeome ID
40/40C06
Characterisation status
biological role published
Feature type
mRNA gene
Genomic location
chromosome II: 197660..199369 reverse strand

Annotation

Comment

PBO:0091666 - long non-coding RNAs (mlonRNA) initiated from sites upstream of fbp1 are transcribed prior to full transcriptional activation of fbp1 during glucose starvation

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Complementation

PBO:0017865 - functionally complements E. coli fbp

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Disease association

MONDO:0009251 - fructose-1,6-bisphosphatase deficiency

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MONDO:0859246 - leukodystrophy, childhood-onset, remitting

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GO biological process

GO:0042149 - cellular response to glucose starvation

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GO:0006094 - gluconeogenesis

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GO cellular component

GO:0005829 - cytosol

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GO:0005634 - nucleus

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GO molecular function

GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity

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Qualitative gene expression

PomGeneEx:0000018 - protein level increased

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PomGeneEx:0000012 - RNA level decreased

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PomGeneEx:0000011 - RNA level increased

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Quantitative gene expression

PBO:0006310 - protein level

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PBO:0011963 - RNA level

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Single locus phenotype

FYPO:0001934 - abolished cell population growth on glycerol carbon source

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Genotypes:

FYPO:0000684 - decreased cell population growth on glycerol carbon source

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Genotypes:

FYPO:0000442 - decreased cell population growth on glycerol/ethanol carbon source

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Genotypes:

FYPO:0000245 - loss of viability in stationary phase

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Genotypes:

FYPO:0000763 - resistance to cadmium

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Genotypes:

FYPO:0002693 - resistance to diamide

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Genotypes:

FYPO:0009038 - resistance to egtazic acid

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Genotypes:

FYPO:0001583 - resistance to lithium

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Genotypes:

FYPO:0009087 - resistance to magnesium chloride and sodium dodecyl sulfate

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Genotypes:

FYPO:0009043 - resistance to potassium chloride and sodium dodecyl sulfate

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Genotypes:

FYPO:0003383 - resistance to tert-butyl hydroperoxide

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Genotypes:

FYPO:0007808 - resistance to valproic acid

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Genotypes:

FYPO:0000799 - sensitive to diamide

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Genotypes:

FYPO:0000089 - sensitive to methyl methanesulfonate

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Genotypes:

FYPO:0000268 - sensitive to UV during vegetative growth

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Genotypes:

FYPO:0000115 - sensitive to valproic acid

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Genotypes:

FYPO:0002060 - viable vegetative cell population

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Genotypes:

FYPO:0002177 - viable vegetative cell with normal cell morphology

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Genotypes:

Taxonomic conservation

PBO:0011067 - conserved in bacteria

PBO:0011065 - conserved in eukaryotes

PBO:0011064 - conserved in fungi

PBO:0011069 - conserved in metazoa

PBO:0011070 - conserved in vertebrates

PBO:0006222 - predominantly single copy (one to one)

Protein features

IDNameInterPro nameDB name
PF18913FBPase_CFBPase_C_domPFAM
PF00316FBPaseFBPase_NPFAM
cd00354FBPaseFBPase_class-1CDD
PS00124FBPASEFructose_bisphosphatase_ASPROSITE_PATTERNS
PR00115F16BPHPHTASEFBPtasePRINTS
G3DSA:3.40.190.80:FF:000001FUNFAM
G3DSA:3.30.540.10:FF:000002FUNFAM
SSF56655Carbohydrate phosphataseSUPERFAMILY
G3DSA:3.40.190.80GENE3D
G3DSA:3.30.540.10GENE3D
PTHR11556FRUCTOSE-1,6-BISPHOSPHATASE-RELATEDFBPase_class-1PANTHER
PIRSF000904FBPtase_SBPaseFBPase_class-1PIRSF
PIRSF500210FBPtaseFBPtasePIRSF
MF_01855FBPase_class1FBPase_class-1HAMAP

Orthologs

References / Literature

PMID:34984977 - Functional profiling of long intergenic non-coding RNAs in fission yeast.
Rodriguez-Lopez M et al. Elife 2022 Jan 05;11
PMID:39705284 - Proteomic and phosphoproteomic analyses reveal that TORC1 is reactivated by pheromone signaling during sexual reproduction in fission yeast.
Bérard M et al. PLoS Biol 2024 Dec 20;22(12):e3002963
PMID:8552099 - Schizosaccharomyces pombe pcr1+ encodes a CREB/ATF protein involved in regulation of gene expression for sexual development.
Watanabe Y et al. Mol Cell Biol 1996 Feb;16(2):704-11
PMID:36358992 - Multi-Layered Regulations on the Chromatin Architectures: Establishing the Tight and Specific Responses of Fission Yeast fbp1 Gene Transcription.
Asada R et al. Biomolecules 2022 Nov 05;12(11)
PMID:1849107 - Glucose repression of transcription of the Schizosaccharomyces pombe fbp1 gene occurs by a cAMP signaling pathway.
Hoffman CS et al. Genes Dev 1991 Apr;5(4):561-71
PMID:11739717 - Protein kinase A regulates sexual development and gluconeogenesis through phosphorylation of the Zn finger transcriptional activator Rst2p in fission yeast.
Higuchi T et al. Mol Cell Biol 2002 Jan;22(1):1-11
PMID:16823372 - ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.
Matsuyama A et al. Nat Biotechnol 2006 Jul;24(7):841-7
PMID:15189983 - Suppressors of an adenylate cyclase deletion in the fission yeast Schizosaccharomyces pombe.
Stiefel J et al. Eukaryot Cell 2004 Jun;3(3):610-9
PMID:11238405 - Transcriptional regulators of the Schizosaccharomyces pombe fbp1 gene include two redundant Tup1p-like corepressors and the CCAAT binding factor activation complex.
Janoo RT et al. Genetics 2001 Mar;157(3):1205-15
PMID:22140232 - Snf1-like protein kinase Ssp2 regulates glucose derepression in Schizosaccharomyces pombe.
Matsuzawa T et al. Eukaryot Cell 2012 Feb;11(2):159-67
PMID:20200159 - The LAMMER kinase homolog, Lkh1, regulates Tup transcriptional repressors through phosphorylation in Schizosaccharomyces pombe.
Kang WH et al. J Biol Chem 2010 Apr 30;285(18):13797-806
PMID:23173672 - Identification of novel genes involved in DNA damage response by screening a genome-wide Schizosaccharomyces pombe deletion library.
Pan X et al. BMC Genomics 2012 Nov 23;13:662
PMID:29967244 - Histone Chaperone Asf1 Is Required for the Establishment of Repressive Chromatin in Schizosaccharomyces pombe fbp1 Gene Repression.
Umeda M et al. Mol Cell Biol 2018 Sep 15;38(18)
PMID:31626996 - Multiplexed proteome profiling of carbon source perturbations in two yeast species with SL-SP3-TMT.
Paulo JA et al. J Proteomics 2020 Jan 06;210:103531
PMID:35286671 - Methods to Assess Phosphodiesterase and/or Adenylyl Cyclase Activity Via Heterologous Expression in Fission Yeast.
Domin M et al. Methods Mol Biol 2022;2483:93-104
PMID:39367033 - Quantitative proteomics and phosphoproteomics profiling of meiotic divisions in the fission yeast Schizosaccharomyces pombe.
Sivakova B et al. Sci Rep 2024 Oct 04;14(1):23105
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:9535817 - Isolation and characterization of an invertase and its repressor genes from Schizosaccharomyces pombe.
Tanaka N et al. Biochem Biophys Res Commun 1998 Apr 07;245(1):246-53
PMID:22730331 - Dual recruitment of Cdc48 (p97)-Ufd1-Npl4 ubiquitin-selective segregase by small ubiquitin-like modifier protein (SUMO) and ubiquitin in SUMO-targeted ubiquitin ligase-mediated genome stability functions.
Nie M et al. J Biol Chem 2012 Aug 24;287(35):29610-9
PMID:27887640 - Functional and regulatory profiling of energy metabolism in fission yeast.
Malecki M et al. Genome Biol 2016 Nov 25;17(1):240
GO_REF:0000024 - Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity.
PMID:2558974 - A transcriptionally regulated expression vector for the fission yeast Schizosaccharomyces pombe.
Hoffman CS et al. Gene 1989 Dec 14;84(2):473-9
PMID:28674280 - Interplay between chromatin modulators and histone acetylation regulates the formation of accessible chromatin in the upstream regulatory region of fission yeast fbp1.
Adachi A et al. Genes Genet Syst 2018 May 03;92(6):267-276
PMID:18430926 - Schizosaccharomyces pombe Hsp90/Git10 is required for glucose/cAMP signaling.
Alaamery MA et al. Genetics 2008 Apr;178(4):1927-36
PMID:27984744 - Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs.
Joh RI et al. Mol Cell 2016 Dec 15;64(6):1088-1101
PMID:9372444 - A zinc finger protein required for stationary phase viability in fission yeast.
Hao Z et al. J Cell Sci 1997 Oct;110 ( Pt 20):2557-66
PB_REF:0000006 - Disease associations from Monarch via human-pombe orthologs
PMID:22370953 - Promotion of glycerol utilization using ethanol and 1-propanol in Schizosaccharomyces pombe.
Matsuzawa T et al. Appl Microbiol Biotechnol 2012 Jul;95(2):441-9
PMID:19266076 - Pro-aging effects of glucose signaling through a G protein-coupled glucose receptor in fission yeast.
Roux AE et al. PLoS Genet 2009 Mar;5(3):e1000408
PMID:27918601 - Identifying genes required for respiratory growth of fission yeast.
Malecki M et al. Wellcome Open Res 2016;1:12
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053
PMID:38252660 - Metabolic stress-induced long ncRNA transcription governs the formation of meiotic DNA breaks in the fission yeast fbp1 gene.
Tsuruta Y et al. PLoS One 2024;19(1):e0294191
PMID:12161753 - The transcriptional program of meiosis and sporulation in fission yeast.
Mata J et al. Nat Genet 2002 Sep;32(1):143-7
PMID:25375137 - Systematic analysis of the role of RNA-binding proteins in the regulation of RNA stability.
Hasan A et al. PLoS Genet 2014 Nov;10(11):e1004684
PMID:7589895 - Liver fructose-1,6-bisphosphatase cDNA: trans-complementation of fission yeast and characterization of two human transcripts.
Bertolotti R et al. Differentiation 1995 Jul;59(1):51-60
PMID:24224056 - The transcription factors Atf1 and Pcr1 are essential for transcriptional induction of the extracellular maltase Agl1 in fission yeast.
Kato H et al. PLoS One 2013;8(11):e80572
PMID:18818364 - Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast.
Roguev A et al. Science 2008 Oct 17;322(5900):405-10
PMID:7862141 - The sak1+ gene of Schizosaccharomyces pombe encodes an RFX family DNA-binding protein that positively regulates cyclic AMP-dependent protein kinase-mediated exit from the mitotic cell cycle.
Wu SY et al. Mol Cell Biol 1995 Mar;15(3):1479-88
PMID:33313903 - Ribosome profiling reveals ribosome stalling on tryptophan codons and ribosome queuing upon oxidative stress in fission yeast.
Rubio A et al. Nucleic Acids Res 2021 Jan 11;49(1):383-399
PMID:2987220 - Isolation of the fructose-1,6-bisphosphatase gene of the yeast Schizosaccharomyces pombe. Evidence for transcriptional regulation.
Vassarotti A et al. J Biol Chem 1985 May 25;260(10):6348-53
PMID:34250083 - Barcode sequencing and a high-throughput assay for chronological lifespan uncover ageing-associated genes in fission yeast.
Romila CA et al. Microb Cell 2021 Jul 05;8(7):146-160
PMID:39476757 - Characterization of Ksg1 protein kinase-dependent phosphoproteome in the fission yeast S. pombe.
Cipak L et al. Biochem Biophys Res Commun 2024 Oct 25;736:150895
PMID:8001792 - Glucose repression of fbp1 transcription of Schizosaccharomyces pombe is partially regulated by adenylate cyclase activation by a G protein alpha subunit encoded by gpa2 (git8).
Nocero M et al. Genetics 1994 Sep;138(1):39-45
PMID:22681890 - Hierarchical modularity and the evolution of genetic interactomes across species.
Ryan CJ et al. Mol Cell 2012 Jun 08;46(5):691-704
PMID:21828039 - Mfc1 is a novel forespore membrane copper transporter in meiotic and sporulating cells.
Beaudoin J et al. J Biol Chem 2011 Sep 30;286(39):34356-72
PMID:2834361 - Characterization of the gene for fructose-1,6-bisphosphatase from Saccharomyces cerevisiae and Schizosaccharomyces pombe. Sequence, protein homology, and expression during growth on glucose.
Rogers DT et al. J Biol Chem 1988 May 05;263(13):6051-7
PMID:2157626 - Isolation and characterization of mutants constitutive for expression of the fbp1 gene of Schizosaccharomyces pombe.
Hoffman CS et al. Genetics 1990 Apr;124(4):807-16
PMID:37787768 - Broad functional profiling of fission yeast proteins using phenomics and machine learning.
Rodríguez-López M et al. Elife 2023 Oct 03;12
PMID:18820678 - Stepwise chromatin remodelling by a cascade of transcription initiation of non-coding RNAs.
Hirota K et al. Nature 2008 Nov 06;456(7218):130-4
PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PMID:20531409 - Global coordination of transcriptional control and mRNA decay during cellular differentiation.
Amorim MJ et al. Mol Syst Biol 2010 Jun 08;6:380
PMID:10567571 - Conservation of histone binding and transcriptional repressor functions in a Schizosaccharomyces pombe Tup1p homolog.
Mukai Y et al. Mol Cell Biol 1999 Dec;19(12):8461-8
PMID:11014802 - Glucose monitoring in fission yeast via the Gpa2 galpha, the git5 Gbeta and the git3 putative glucose receptor.
Welton RM et al. Genetics 2000 Oct;156(2):513-21
PMID:9829945 - Methionine induces sexual development in the fission yeast Schizosaccharomyces pombe via an ste11-dependent signalling pathway.
Schweingruber AM et al. J Bacteriol 1998 Dec;180(23):6338-41
PMID:22840777 - Analyzing fission yeast multidrug resistance mechanisms to develop a genetically tractable model system for chemical biology.
Kawashima SA et al. Chem Biol 2012 Jul 27;19(7):893-901
PMID:8832415 - The wis1 signal transduction pathway is required for expression of cAMP-repressed genes in fission yeast.
Stettler S et al. J Cell Sci 1996 Jul;109 ( Pt 7):1927-35
PMID:24297439 - Sck1 negatively regulates Gpa2-mediated glucose signaling in Schizosaccharomyces pombe.
Mudge DK et al. Eukaryot Cell 2014 Feb;13(2):202-8
PMID:29432178 - General amino acid control in fission yeast is regulated by a nonconserved transcription factor, with functions analogous to Gcn4/Atf4.
Duncan CDS et al. Proc Natl Acad Sci U S A 2018 Feb 20;115(8):E1829-E1838
PMID:28934464 - Recruitment and delivery of the fission yeast Rst2 transcription factor via a local genome structure counteracts repression by Tup1-family corepressors.
Asada R et al. Nucleic Acids Res 2017 Sep 19;45(16):9361-9371