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protein coding gene - SPBC16A3.14 - mitochondrial ribosomal protein subunit S43b

Gene summary

Systematic ID
SPBC16A3.14
Product
mitochondrial ribosomal protein subunit S43b
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
O42919
ORFeome ID
15/15F01
Characterisation status
biological role inferred
Feature type
mRNA gene
Genomic location
chromosome II: 4270991..4272032 reverse strand

Annotation

PBO:0000721 - 1.15.1.1

GO biological process

GO:0032543 - mitochondrial translation

References:

GO:0006801 - superoxide metabolic process

References:

GO cellular component

GO:0005763 - mitochondrial small ribosomal subunit

References:

GO molecular function

GO:0046872 - metal ion binding

References:

GO:0003735 - structural constituent of ribosome

References:

GO:0004784 - superoxide dismutase activity

References:

Protein sequence feature

SO:0001808 - mitochondrial_targeting_signal

References:

Quantitative gene expression

PBO:0006310 - protein level

References:

PBO:0011963 - RNA level

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Single locus phenotype

FYPO:0004806 - incomplete cell wall disassembly at cell fusion site

References:

Genotypes:

FYPO:0000073 - resistance to caffeine

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Genotypes:

FYPO:0001103 - resistance to hydrogen peroxide

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Genotypes:

FYPO:0009085 - resistance to lithium chloride and sodium dodecyl sulfate

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Genotypes:

FYPO:0009043 - resistance to potassium chloride and sodium dodecyl sulfate

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Genotypes:

FYPO:0000077 - resistance to rapamycin

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Genotypes:

FYPO:0000104 - sensitive to cycloheximide

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Genotypes:

FYPO:0007931 - sensitive to egtazic acid

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Genotypes:

FYPO:0001719 - sensitive to lithium

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Genotypes:

FYPO:0002060 - viable vegetative cell population

References:

Genotypes:

FYPO:0002177 - viable vegetative cell with normal cell morphology

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Genotypes:

Taxonomic conservation

PBO:0011067 - conserved in bacteria

PBO:0011065 - conserved in eukaryotes

PBO:0011064 - conserved in fungi

Protein features

IDNameInterPro nameDB name
PF02777Sod_Fe_CMn/Fe_SOD_CPFAM
SSF54719Fe,Mn superoxide dismutase (SOD), C-terminal domainSOD_C_sfSUPERFAMILY
SSF46609Fe,Mn superoxide dismutase (SOD), N-terminal domainMn/Fe_SOD_N_sfSUPERFAMILY
G3DSA:1.10.287.990Fe,Mn superoxide dismutase (SOD) domainMn/Fe_SOD_N_sfGENE3D
G3DSA:3.55.40.20SOD_C_sfGENE3D
PTHR4359537S RIBOSOMAL PROTEIN S26, MITOCHONDRIALPANTHER

Orthologs

References / Literature

GO_REF:0000002 - Comments
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053
PMID:24763107 - Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).
Carpy A et al. Mol Cell Proteomics 2014 Aug;13(8):1925-36
PMID:30355493 - Expanded Interactome of the Intrinsically Disordered Protein Dss1.
Schenstrøm SM et al. Cell Rep 2018 Oct 23;25(4):862-870
PMID:28410370 - A systematic screen for morphological abnormalities during fission yeast sexual reproduction identifies a mechanism of actin aster formation for cell fusion.
Dudin O et al. PLoS Genet 2017 Apr;13(4):e1006721
PMID:37787768 - Broad functional profiling of fission yeast proteins using phenomics and machine learning.
Rodríguez-López M et al. Elife 2023 Oct 03;12
PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
GO_REF:0000024 - Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity.
PMID:36408920 - UniProt: the Universal Protein Knowledgebase in 2023.
UniProt Consortium Nucleic Acids Res 2023 Jan 06;51(D1):D523-D531
PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83