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protein coding gene - prs5 (SPBC3D6.06c) - ribose-phosphate pyrophosphokinase Prs5

Gene summary

Standard name
prs5
Systematic ID
SPBC3D6.06c
Product
ribose-phosphate pyrophosphokinase Prs5
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
P87171
ORFeome ID
23/23C10
Characterisation status
biological role inferred
Feature type
mRNA gene
Genomic location
chromosome II: 1279752..1281379 reverse strand

Annotation

PBO:0001622 - 2.7.6.1

Disease association

MONDO:0010533 - Arts syndrome

References:

MONDO:0015626 - Charcot-Marie-Tooth disease

References:

MONDO:0010699 - Charcot-Marie-Tooth disease X-linked recessive 5

References:

MONDO:0010577 - hearing loss, X-linked 1

References:

MONDO:0019254 - inborn disorder of purine or pyrimidine metabolism

References:

MONDO:0005066 - metabolic disease

References:

MONDO:0005071 - nervous system disorder

References:

MONDO:0010395 - phosphoribosylpyrophosphate synthetase superactivity

References:

GO biological process

GO:0006015 - 5-phosphoribose 1-diphosphate biosynthetic process

References:

GO:0006164 - purine nucleotide biosynthetic process

References:

GO:0009156 - ribonucleoside monophosphate biosynthetic process

References:

GO cellular component

GO:0005737 - cytoplasm

References:

GO:0002189 - ribose phosphate diphosphokinase complex

References:

GO molecular function

GO:0000287 - magnesium ion binding

References:

GO:0004749 - ribose phosphate diphosphokinase activity

References:

Qualitative gene expression

PomGeneEx:0000019 - protein level decreased

References:

PomGeneEx:0000011 - RNA level increased

References:

Quantitative gene expression

PBO:0006310 - protein level

References:

PBO:0011963 - RNA level

References:

Single locus phenotype

FYPO:0000684 - decreased cell population growth on glycerol carbon source

References:

Genotypes:

FYPO:0000245 - loss of viability in stationary phase

References:

Genotypes:

FYPO:0009038 - resistance to egtazic acid

References:

Genotypes:

FYPO:0009083 - resistance to lithium chloride and methyl methanesulfonate

References:

Genotypes:

FYPO:0009087 - resistance to magnesium chloride and sodium dodecyl sulfate

References:

Genotypes:

FYPO:0009043 - resistance to potassium chloride and sodium dodecyl sulfate

References:

Genotypes:

FYPO:0003383 - resistance to tert-butyl hydroperoxide

References:

Genotypes:

FYPO:0000088 - sensitive to hydroxyurea

References:

Genotypes:

FYPO:0002060 - viable vegetative cell population

References:

Genotypes:

FYPO:0002177 - viable vegetative cell with normal cell morphology

References:

Genotypes:

Taxonomic conservation

PBO:0011067 - conserved in bacteria

PBO:0011065 - conserved in eukaryotes

PBO:0011064 - conserved in fungi

PBO:0011069 - conserved in metazoa

PBO:0011070 - conserved in vertebrates

Protein features

IDNameInterPro nameDB name
PF13793Pribosyltran_NPribosyltran_NPFAM
PF14572Pribosyl_synthRib-P_diPkinasePFAM
cd06223PRTases_typeIPRTase_domCDD
PS00114PRPP_SYNTHASEPRib_PP_synth_CSPROSITE_PATTERNS
SM01400Pribosyltran_N_2SMART
G3DSA:3.40.50.2020:FF:000005FUNFAM
G3DSA:3.40.50.2020:FF:000007FUNFAM
SSF53271PRTase-likePRTase-likeSUPERFAMILY
G3DSA:3.40.50.2020PRTase-likeGENE3D
PTHR10210RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBERRib-P_diPkinasePANTHER
TIGR01251ribP_PPkinRib-P_diPkinaseNCBIFAM

Orthologs

References / Literature

GO_REF:0000033 - Annotation inferences using phylogenetic trees
PMID:40015273 - A comprehensive Schizosaccharomyces pombe atlas of physical transcription factor interactions with proteins and chromatin.
Skribbe M et al. Mol Cell 2025 Feb 19;
PMID:22681890 - Hierarchical modularity and the evolution of genetic interactomes across species.
Ryan CJ et al. Mol Cell 2012 Jun 08;46(5):691-704
PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:24763107 - Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).
Carpy A et al. Mol Cell Proteomics 2014 Aug;13(8):1925-36
PMID:34028542 - TORC2 inhibition of α-arrestin Aly3 mediates cell surface persistence of S. pombe Ght5 glucose transporter in low glucose.
Toyoda Y et al. J Cell Sci 2021 May 15;134(10)
PMID:34250083 - Barcode sequencing and a high-throughput assay for chronological lifespan uncover ageing-associated genes in fission yeast.
Romila CA et al. Microb Cell 2021 Jul 05;8(7):146-160
PMID:34496258 - Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription.
Heo DH et al. Cell Rep 2021 Sep 07;36(10):109671
GO_REF:0000002 - Comments
PMID:22730331 - Dual recruitment of Cdc48 (p97)-Ufd1-Npl4 ubiquitin-selective segregase by small ubiquitin-like modifier protein (SUMO) and ubiquitin in SUMO-targeted ubiquitin ligase-mediated genome stability functions.
Nie M et al. J Biol Chem 2012 Aug 24;287(35):29610-9
PMID:23293578 - Molecular genetics of charcot-marie-tooth disease: from genes to genomes.
Azzedine H et al. Mol Syndromol 2012 Nov;3(5):204-14
PMID:39367033 - Quantitative proteomics and phosphoproteomics profiling of meiotic divisions in the fission yeast Schizosaccharomyces pombe.
Sivakova B et al. Sci Rep 2024 Oct 04;14(1):23105
PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:23173672 - Identification of novel genes involved in DNA damage response by screening a genome-wide Schizosaccharomyces pombe deletion library.
Pan X et al. BMC Genomics 2012 Nov 23;13:662
PMID:27918601 - Identifying genes required for respiratory growth of fission yeast.
Malecki M et al. Wellcome Open Res 2016;1:12
PB_REF:0000006 - Disease associations from Monarch via human-pombe orthologs
TreeFam:TF106366 - Unknown title
PMID:12161753 - The transcriptional program of meiosis and sporulation in fission yeast.
Mata J et al. Nat Genet 2002 Sep;32(1):143-7
GO_REF:0000024 - Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity.
PB_REF:0000003 - Disease Association Curation
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053
PMID:37787768 - Broad functional profiling of fission yeast proteins using phenomics and machine learning.
Rodríguez-López M et al. Elife 2023 Oct 03;12