PomBase home

protein coding gene - SPBC3H7.04 - mitochondrial ribosomal protein subunit S43a

Gene summary

Systematic ID
SPBC3H7.04
Product
mitochondrial ribosomal protein subunit S43a
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
O74379
ORFeome ID
07/07F05
Characterisation status
biological role inferred
Feature type
mRNA gene
Genomic location
chromosome II: 1875654..1876781 reverse strand

Annotation

GO biological process

GO:0032543 - mitochondrial translation

References:

GO:0006801 - superoxide metabolic process

References:

GO cellular component

GO:0005763 - mitochondrial small ribosomal subunit

References:

GO molecular function

GO:0046872 - metal ion binding

References:

GO:0003735 - structural constituent of ribosome

References:

GO:0004784 - superoxide dismutase activity

References:

Qualitative gene expression

PomGeneEx:0000019 - protein level decreased

References:

Quantitative gene expression

PBO:0006310 - protein level

References:

PBO:0011963 - RNA level

References:

Single locus phenotype

FYPO:0002111 - inviable tapered vegetative cell

References:

Genotypes:

FYPO:0002061 - inviable vegetative cell population

References:

Genotypes:

Taxonomic conservation

PBO:0011067 - conserved in bacteria

PBO:0011065 - conserved in eukaryotes

PBO:0011064 - conserved in fungi

Protein features

IDNameInterPro nameDB name
PF02777Sod_Fe_CMn/Fe_SOD_CPFAM
G3DSA:3.55.40.20:FF:000009FUNFAM
SSF54719Fe,Mn superoxide dismutase (SOD), C-terminal domainSOD_C_sfSUPERFAMILY
SSF46609Fe,Mn superoxide dismutase (SOD), N-terminal domainMn/Fe_SOD_N_sfSUPERFAMILY
G3DSA:3.55.40.20SOD_C_sfGENE3D
PTHR4359537S RIBOSOMAL PROTEIN S26, MITOCHONDRIALPANTHER

Orthologs

References / Literature

PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
GO_REF:0000002 - Comments
PMID:39367033 - Quantitative proteomics and phosphoproteomics profiling of meiotic divisions in the fission yeast Schizosaccharomyces pombe.
Sivakova B et al. Sci Rep 2024 Oct 04;14(1):23105
PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
GO_REF:0000024 - Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity.
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053