protein coding gene - SPBC3H7.04 - mitochondrial ribosomal protein subunit S43a

Gene summary

Systematic ID: SPBC3H7.04
Product: mitochondrial ribosomal protein subunit S43a
Organism: Schizosaccharomyces pombe (fission yeast)
UniProt ID: O74379
ORFeome ID: 07/07F05
Characterisation status: biological role inferred
Feature type: mRNA gene
Genomic location: chromosome II: 1875654..1876781 reverse strand

Annotation

GO biological process

GO:0032543 - mitochondrial translation

References:

GO_REF:0000024

GO:0019430 - removal of superoxide radicals

References:

GO_REF:0000108

GO cellular component

GO:0005763 - mitochondrial small ribosomal subunit

References:

GO_REF:0000024

GO molecular function

GO:0003735 - structural constituent of ribosome

References:

GO_REF:0000024

Qualitative gene expression

PomGeneEx:0000019 - protein level decreased

References:

PMID:39367033

Quantitative gene expression

PBO:0006310 - protein level

References:

PMID:23101633

PBO:0011963 - RNA level

References:

PMID:23101633

Single locus phenotype

FYPO:0002111 - inviable tapered vegetative cell

References:

PMID:23697806

Genotypes:

SPBC3H7.04delta

FYPO:0002061 - inviable vegetative cell population

References:

Genotypes:

SPBC3H7.04delta

Taxonomic conservation

PBO:0011067 - conserved in bacteria

PBO:0011065 - conserved in eukaryotes

PBO:0011064 - conserved in fungi

Protein features

ID	Name	InterPro name	DB name
PF02777	Sod_Fe_C	Mn/Fe_SOD_C	Pfam
G3DSA:3.55.40.20:FF:000009			CATH-FunFam
G3DSA:3.55.40.20		SOD_C_sf	CATH-Gene3D
SSF46609		Mn/Fe_SOD_N_sf	SUPERFAMILY
SSF54719		SOD_C_sf	SUPERFAMILY
PTHR43595			PANTHER

Orthologs

SJAG_01734 Schizosaccharomyces japonicus
MRP1 (YDR347W) Saccharomyces cerevisiae
RSM26 (YJR101W) Saccharomyces cerevisiae

References / Literature

GO_REF:0000024 - Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity.
GO_REF:0000108 - Automatic assignment of GO terms using logical inference, based on on inter-ontology links.
PMID:39367033 - Quantitative proteomics and phosphoproteomics profiling of meiotic divisions in the fission yeast Schizosaccharomyces pombe.: Sivakova B et al. Sci Rep 2024 Oct 04;14(1):23105
PMID:21511999 - Comparative functional genomics of the fission yeasts.: Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.: Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.: Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.: Hayles J et al. Open Biol 2013 May 22;3(5):130053