protein coding gene - hsk1 (SPBC776.12c) - Dbf4(Dfp1)-dependent protein kinase Hsk1
Gene summary
- Standard name
- hsk1
- Systematic ID
- SPBC776.12c
- Product
- Dbf4(Dfp1)-dependent protein kinase Hsk1
- Organism
- Schizosaccharomyces pombe
(fission yeast)
- Synonyms
- cdc7
- UniProt ID
- P50582
- ORFeome ID
- 40/40F05
- Characterisation status
- biological role published
- Feature type
- mRNA gene
- Genomic location
- chromosome II: 3197060..3199201 reverse strand
Annotation
Multi-locus phenotype
References:
Genotypes:
- cdc19-P1(P257L,T272I aa) hsk1-89(L339P,E403K,L416P aa)
- cdc22-M45(unknown) hsk1-89(L339P,E403K,L416P aa)
- cds1delta hsk1-89(L339P,E403K,L416P aa)
- chk1delta hsk1-89(L339P,E403K,L416P aa)
- hsk1-89(L339P,E403K,L416P aa) rad3delta
References:
Genotypes:
- cdc19-P1(P257L,T272I aa) hsk1-89(L339P,E403K,L416P aa)
- cdc21-M68(unknown) hsk1-89(L339P,E403K,L416P aa)
- cds1delta hsk1-1312(S314I aa)
- cds1delta hsk1-89(L339P,E403K,L416P aa)
- dfp1+(wild type)[Overexpression] hsk1-89(L339P,E403K,L416P aa)
- eso1-G799D(aa) hsk1-89(L339P,E403K,L416P aa)
- hsk1-1312(S314I aa) rad4delta
- hsk1-89(L339P,E403K,L416P aa) hsk1-K129R(aa)
- hsk1-89(L339P,E403K,L416P aa) hsk1-K129R-K130S(K129R,K130S aa)
- hsk1-89(L339P,E403K,L416P aa) hsk1-K130S(aa)
- hsk1-89(L339P,E403K,L416P aa) mrc1(157-781)(1-156,782-1019 Δaa)
- hsk1-89(L339P,E403K,L416P aa) mrc1(536-673)-mrc(536-673)tandemfusion(mrc1(536-673)-mrc1(536-673))
- hsk1-89(L339P,E403K,L416P aa) mrc1(782-879)(1-781,880-1019 Δaa)
- hsk1-89(L339P,E403K,L416P aa) mrc1-3A(S604A,T645A,T653A aa)
- hsk1-89(L339P,E403K,L416P aa) mrc1delta
- hsk1-89(L339P,E403K,L416P aa) rad21-K1(unknown)
- hsk1-89(L339P,E403K,L416P aa) rad3delta
- hsk1-89(L339P,E403K,L416P aa) rif1-12D(S19D,T20D,S23A,S29D,S30D,S31D,S44D,S45D,S50D,T68D,S69D,T70D,S88D aa)
- hsk1-89(L339P,E403K,L416P aa) rif1-7APP1(T20A,S23A,S31A,V41A,F43A,S45A,S50A,I65A,L66A,T70A,S88A aa)
- hsk1-89(L339P,E403K,L416P aa) rif1-PP1(V41A,F43A,I65A,L66A aa)
- hsk1-89(L339P,E403K,L416P aa) rif1delta
- hsk1-89(L339P,E403K,L416P aa) rif1delta taz1delta
- hsk1-89(L339P,E403K,L416P aa) swi1delta
- hsk1-89(L339P,E403K,L416P aa) swi3delta
- hsk1-89(L339P,E403K,L416P aa) taz1delta
- hsk1delta mrc1-3A(S604A,T645A,T653A aa)
- hsk1delta mrc1-3A(S604A,T645A,T653A aa) rif1delta
- hsk1delta mrc1delta
- hsk1delta mrc1delta rif1delta
- hsk1delta rif1delta
References:
Genotypes:
- dfp1+(wild type)[Overexpression] hsk1-89(L339P,E403K,L416P aa)
- hsk1-89(L339P,E403K,L416P aa) hsk1-K129R-K130S(K129R,K130S aa)
- hsk1-89(L339P,E403K,L416P aa) hsk1-KK(KK129RS aa)[Overexpression]
- hsk1-89(L339P,E403K,L416P aa) mrc1(536-673)(1-535,674-1019 Δaa)
- hsk1-89(L339P,E403K,L416P aa) rif1-7A(T20A,S23A,S31A,S45A,S50A,T70A,S88A aa)
- hsk1-89(L339P,E403K,L416P aa) rif1delta taz1delta
- hsk1delta rif1delta
References:
Genotypes:
- cds1delta hsk1-1312(S314I aa)
- hsk1-89(L339P,E403K,L416P aa) hsk1-KK(KK129RS aa)
- hsk1-89(L339P,E403K,L416P aa) hsk1-KK(KK129RS aa)[Overexpression]
- hsk1-89(L339P,E403K,L416P aa) hsk1-kd(K129D aa)
- hsk1-89(L339P,E403K,L416P aa) hsk1-kd(K129D aa)[Overexpression]
- hsk1-89(L339P,E403K,L416P aa) mrc1(782-879)(1-781,880-1019 Δaa)
- hsk1-89(L339P,E403K,L416P aa) mrc1delta
- hsk1-89(L339P,E403K,L416P aa) rif1delta
- hsk1-89(L339P,E403K,L416P aa) swi1delta
- hsk1-89(L339P,E403K,L416P aa) swi3delta
Qualitative gene expression
Quantitative gene expression
Protein features
| ID | Name | InterPro name | DB name |
| PF00069 | Pkinase | Prot_kinase_dom | Pfam |
| cd14019 | STKc_Cdc7 | | CDD |
| PS00108 | PROTEIN_KINASE_ST | Ser/Thr_kinase_AS | PROSITE patterns |
| PS50011 | PROTEIN_KINASE_DOM | Prot_kinase_dom | PROSITE profiles |
| SM00220 | S_TKc | Prot_kinase_dom | SMART |
| G3DSA:1.10.510.10 | | | CATH-Gene3D |
| G3DSA:3.30.200.20 | | | CATH-Gene3D |
| SSF56112 | | Kinase-like_dom_sf | SUPERFAMILY |
| PTHR44167 | | | PANTHER |
| mobidb-lite-Disorder | disorder_prediction | | MobiDB-Disorder |
Orthologs
- CDC7 (HGNC:1745) Homo sapiens
- hsk1 (SJAG_03160) Schizosaccharomyces japonicus
- CDC7 (YDL017W) Saccharomyces cerevisiae
References / Literature
- PMID:21518960 - Mrc1 marks early-firing origins and coordinates timing and efficiency of initiation in fission yeast.
- Hayano M et al. Mol Cell Biol 2011 Jun;31(12):2380-91
- PMID:10411894 - Cell cycle regulation of Dfp1, an activator of the Hsk1 protein kinase.
- Brown GW et al. Proc Natl Acad Sci U S A 1999 Jul 20;96(15):8443-8
- PMID:16823372 - ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.
- Matsuyama A et al. Nat Biotechnol 2006 Jul;24(7):841-7
- PMID:27298342 - Identification of S-phase DNA damage-response targets in fission yeast reveals conservation of damage-response networks.
- Willis NA et al. Proc Natl Acad Sci U S A 2016 Jun 28;113(26):E3676-85
- PMID:16141239 - Endocytosis in fission yeast is spatially associated with the actin cytoskeleton during polarised cell growth and cytokinesis.
- Gachet Y et al. J Cell Sci 2005 Sep 15;118(Pt 18):4231-42
- PMID:14508607 - Ibp1p, a novel Cdc25-related phosphatase, suppresses Schizosaccharomyces pombe hsk1 ( cdc7).
- Snaith HA et al. Curr Genet 2003 Oct;44(1):38-48
- PMID:18257517 - Phosphoproteome analysis of fission yeast.
- Wilson-Grady JT et al. J Proteome Res 2008 Mar;7(3):1088-97
- PMID:19547744 - Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species.
- Beltrao P et al. PLoS Biol 2009 Jun 16;7(6):e1000134
- PMID:23045396 - Continued DNA synthesis in replication checkpoint mutants leads to fork collapse.
- Sabatinos SA et al. Mol Cell Biol 2012 Dec;32(24):4986-97
- PMID:12052858 - A conserved domain of Schizosaccharomyces pombe dfp1(+) is uniquely required for chromosome stability following alkylation damage during S phase.
- Fung AD et al. Mol Cell Biol 2002 Jul;22(13):4477-90
- PMID:27473316 - Characterization of a Novel MMS-Sensitive Allele of Schizosaccharomyces pombe mcm4.
- Ranatunga NS et al. G3 (Bethesda) 2016 Oct 13;6(10):3049-3063
- PMID:30726745 - Fission Yeast NDR/LATS Kinase Orb6 Regulates Exocytosis via Phosphorylation of the Exocyst Complex.
- Tay YD et al. Cell Rep 2019 Feb 05;26(6):1654-1667.e7
- PMID:12604790 - The Cdc23 (Mcm10) protein is required for the phosphorylation of minichromosome maintenance complex by the Dfp1-Hsk1 kinase.
- Lee JK et al. Proc Natl Acad Sci U S A 2003 Mar 04;100(5):2334-9
- PMID:33313903 - Ribosome profiling reveals ribosome stalling on tryptophan codons and ribosome queuing upon oxidative stress in fission yeast.
- Rubio A et al. Nucleic Acids Res 2021 Jan 11;49(1):383-399
- PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
- Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
- PMID:31719112 - Checkpoint Regulation of Nuclear Tos4 Defines S Phase Arrest in Fission Yeast.
- Kim SM et al. G3 (Bethesda) 2020 Jan 07;10(1):255-266
- PMID:15338237 - Schizosaccharomyces pombe replication protein Cdc45/Sna41 requires Hsk1/Cdc7 and Rad4/Cut5 for chromatin binding.
- Dolan WP et al. Chromosoma 2004 Sep;113(3):145-56
- PMID:18505873 - Schizosaccharomyces pombe histone acetyltransferase Mst1 (KAT5) is an essential protein required for damage response and chromosome segregation.
- Gómez EB et al. Genetics 2008 Jun;179(2):757-71
- PMID:11359920 - Regulation of initiation of S phase, replication checkpoint signaling, and maintenance of mitotic chromosome structures during S phase by Hsk1 kinase in the fission yeast.
- Takeda T et al. Mol Biol Cell 2001 May;12(5):1257-74
- PMID:23862021 - The C-terminus of S. pombe DDK subunit Dfp1 is required for meiosis-specific transcription and cohesin cleavage.
- Le AH et al. Biol Open 2013 Jul 15;2(7):728-38
- PMID:26201080 - The DNA-Binding Domain of S. pombe Mrc1 (Claspin) Acts to Enhance Stalling at Replication Barriers.
- Zech J et al. PLoS One 2015;10(7):e0132595
- PMID:27320927 - Rif1 Regulates the Fate of DNA Entanglements during Mitosis.
- Zaaijer S et al. Cell Rep 2016 Jun 28;16(1):148-160
- PMID:11402029 - Bipartite binding of a kinase activator activates Cdc7-related kinase essential for S phase.
- Ogino K et al. J Biol Chem 2001 Aug 17;276(33):31376-87
- PMID:18799612 - The Hsk1(Cdc7) replication kinase regulates origin efficiency.
- Patel PK et al. Mol Biol Cell 2008 Dec;19(12):5550-8
- PMID:21099360 - Hsk1 kinase and Cdc45 regulate replication stress-induced checkpoint responses in fission yeast.
- Matsumoto S et al. Cell Cycle 2010 Dec 01;9(23):4627-37
- PMID:21511999 - Comparative functional genomics of the fission yeasts.
- Rhind N et al. Science 2011 May 20;332(6032):930-6
- PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
- Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
- PMID:7621824 - hsk1+, a Schizosaccharomyces pombe gene related to Saccharomyces cerevisiae CDC7, is required for chromosomal replication.
- Masai H et al. EMBO J 1995 Jul 03;14(13):3094-104
- PMID:20176980 - Fission yeast Hsk1 (Cdc7) kinase is required after replication initiation for induced mutagenesis and proper response to DNA alkylation damage.
- Dolan WP et al. Genetics 2010 May;185(1):39-53
- PMID:22024164 - Multiple pathways can bypass the essential role of fission yeast Hsk1 kinase in DNA replication initiation.
- Matsumoto S et al. J Cell Biol 2011 Oct 31;195(3):387-401
- PMID:34608864 - DDK/Hsk1 phosphorylates and targets fission yeast histone deacetylase Hst4 for degradation to stabilize stalled DNA replication forks.
- Aricthota S et al. Elife 2021 Oct 05;10
- PMID:24656819 - Protein phosphatase 1 recruitment by Rif1 regulates DNA replication origin firing by counteracting DDK activity.
- Davé A et al. Cell Rep 2014 Apr 10;7(1):53-61
- PMID:22681890 - Hierarchical modularity and the evolution of genetic interactomes across species.
- Ryan CJ et al. Mol Cell 2012 Jun 08;46(5):691-704
- PMID:10886372 - The Schizosaccharomyces pombe spo6+ gene encoding a nuclear protein with sequence similarity to budding yeast Dbf4 is required for meiotic second division and sporulation.
- Nakamura T et al. Genes Cells 2000 Jun;5(6):463-79
- PMID:10545452 - Drc1p/Cps1p, a 1,3-beta-glucan synthase subunit, is essential for division septum assembly in Schizosaccharomyces pombe.
- Liu J et al. Genetics 1999 Nov;153(3):1193-203
- PMID:22279046 - Rif1 is a global regulator of timing of replication origin firing in fission yeast.
- Hayano M et al. Genes Dev 2012 Jan 15;26(2):137-50
- PMID:18180284 - Minichromosome maintenance proteins interact with checkpoint and recombination proteins to promote s-phase genome stability.
- Bailis JM et al. Mol Cell Biol 2008 Mar;28(5):1724-38
- PMID:20230746 - Hsk1- and SCF(Pof3)-dependent proteolysis of S. pombe Ams2 ensures histone homeostasis and centromere function.
- Takayama Y et al. Dev Cell 2010 Mar 16;18(3):385-96
- PMID:28069740 - Checkpoint-Independent Regulation of Origin Firing by Mrc1 through Interaction with Hsk1 Kinase.
- Matsumoto S et al. Mol Cell Biol 2017 Apr 01;37(7)
- PMID:12455694 - mcl1+, the Schizosaccharomyces pombe homologue of CTF4, is important for chromosome replication, cohesion, and segregation.
- Williams DR et al. Eukaryot Cell 2002 Oct;1(5):758-73
- PMID:33823663 - A TOR (target of rapamycin) and nutritional phosphoproteome of fission yeast reveals novel targets in networks conserved in humans.
- Halova L et al. Open Biol 2021 Apr;11(4):200405
- PMID:14625560 - Hsk1-Dfp1 is required for heterochromatin-mediated cohesion at centromeres.
- Bailis JM et al. Nat Cell Biol 2003 Dec;5(12):1111-6
- PMID:19422421 - Interactions between Swi1-Swi3, Mrc1 and S phase kinase, Hsk1 may regulate cellular responses to stalled replication forks in fission yeast.
- Shimmoto M et al. Genes Cells 2009 Jun;14(6):669-82
- PMID:21095590 - DDK phosphorylates checkpoint clamp component Rad9 and promotes its release from damaged chromatin.
- Furuya K et al. Mol Cell 2010 Nov 24;40(4):606-18
- PMID:12161753 - The transcriptional program of meiosis and sporulation in fission yeast.
- Mata J et al. Nat Genet 2002 Sep;32(1):143-7
- PMID:16263721 - Hsk1-Dfp1/Him1, the Cdc7-Dbf4 kinase in Schizosaccharomyces pombe, associates with Swi1, a component of the replication fork protection complex.
- Matsumoto S et al. J Biol Chem 2005 Dec 30;280(52):42536-42
- PMID:23322785 - The fission yeast minichromosome maintenance (MCM)-binding protein (MCM-BP), Mcb1, regulates MCM function during prereplicative complex formation in DNA replication.
- Santosa V et al. J Biol Chem 2013 Mar 08;288(10):6864-80
- PMID:29996109 - Quantitative Phosphoproteomics Reveals the Signaling Dynamics of Cell-Cycle Kinases in the Fission Yeast Schizosaccharomyces pombe.
- Swaffer MP et al. Cell Rep 2018 Jul 10;24(2):503-514
- GO_REF:0000033 - Annotation inferences using phylogenetic trees
-
- PMID:19443688 - Diverse roles of HP1 proteins in heterochromatin assembly and functions in fission yeast.
- Fischer T et al. Proc Natl Acad Sci U S A 2009 Jun 02;106(22):8998-9003
- PMID:9705352 - Purification of Hsk1, a minichromosome maintenance protein kinase from fission yeast.
- Brown GW et al. J Biol Chem 1998 Aug 21;273(34):22083-90
- PMID:16199868 - Schizosaccharomyces pombe mst2+ encodes a MYST family histone acetyltransferase that negatively regulates telomere silencing.
- Gómez EB et al. Mol Cell Biol 2005 Oct;25(20):8887-903
- PMID:21712547 - Mitotic substrates of the kinase aurora with roles in chromatin regulation identified through quantitative phosphoproteomics of fission yeast.
- Koch A et al. Sci Signal 2011 Jun 28;4(179):rs6
- PMID:24763107 - Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).
- Carpy A et al. Mol Cell Proteomics 2014 Aug;13(8):1925-36
- PMID:15643072 - Mcl1p is a polymerase alpha replication accessory factor important for S-phase DNA damage survival.
- Williams DR et al. Eukaryot Cell 2005 Jan;4(1):166-77
- PMID:39367033 - Quantitative proteomics and phosphoproteomics profiling of meiotic divisions in the fission yeast Schizosaccharomyces pombe.
- Sivakova B et al. Sci Rep 2024 Oct 04;14(1):23105
- PMID:11027263 - Schizosaccharomyces pombe Hsk1p is a potential cds1p target required for genome integrity.
- Snaith HA et al. Mol Cell Biol 2000 Nov;20(21):7922-32
- PMID:11606526 - Characterization of Schizosaccharomyces pombe mcm7(+) and cdc23(+) (MCM10) and interactions with replication checkpoints.
- Liang DT et al. Genetics 2001 Oct;159(2):471-86
- PMID:10409743 - A fission yeast gene, him1(+)/dfp1(+), encoding a regulatory subunit for Hsk1 kinase, plays essential roles in S-phase initiation as well as in S-phase checkpoint control and recovery from DNA damage.
- Takeda T et al. Mol Cell Biol 1999 Aug;19(8):5535-47
- PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
- Hayles J et al. Open Biol 2013 May 22;3(5):130053
- PMID:12972571 - Fission yeast Cdc23/Mcm10 functions after pre-replicative complex formation to promote Cdc45 chromatin binding.
- Gregan J et al. Mol Biol Cell 2003 Sep;14(9):3876-87
- PMID:36408920 - UniProt: the Universal Protein Knowledgebase in 2023.
- UniProt Consortium Nucleic Acids Res 2023 Jan 06;51(D1):D523-D531
- PMID:25720772 - Quantitative phosphoproteomics reveals pathways for coordination of cell growth and division by the conserved fission yeast kinase pom1.
- Kettenbach AN et al. Mol Cell Proteomics 2015 May;14(5):1275-87