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protein coding gene - SPBCPT2R1.04c - S. pombe specific DUF999 family protein 10

Gene summary

Systematic ID
SPBCPT2R1.04c
Product
S. pombe specific DUF999 family protein 10
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
P0CT99
ORFeome ID
52/52C09
Characterisation status
Schizosaccharomyces pombe specific protein, uncharacterized
Feature type
mRNA gene
Genomic location
chromosome II: 4513401..4514601 reverse strand

Annotation

Genome organisation

PBO:0000066 - telomeric duplication

Protein sequence feature

SO:0001812 - transmembrane_helix

References:

Qualitative gene expression

PomGeneEx:0000018 - protein level increased

References:

Quantitative gene expression

PBO:0011963 - RNA level

References:

Single locus phenotype

FYPO:0002060 - viable vegetative cell population

References:

Genotypes:

FYPO:0002177 - viable vegetative cell with normal cell morphology

References:

Genotypes:

Taxonomic conservation

PBO:0016878 - Schizosaccharomyces pombe specific

Protein features

IDNameInterPro nameDB name
PF06198DUF999DUF999Pfam
Transmembrane alpha helixDeepTMHMM

References / Literature

PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053
PMID:11152613 - Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
Krogh A et al. J Mol Biol 2001 Jan 19;305(3):567-80
PMID:39367033 - Quantitative proteomics and phosphoproteomics profiling of meiotic divisions in the fission yeast Schizosaccharomyces pombe.
Sivakova B et al. Sci Rep 2024 Oct 04;14(1):23105