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protein coding gene - ftm7 (SPBPB2B2.17c) - sub-telomeric 5Tm protein family Ftm7

Gene summary

Standard name
ftm7
Systematic ID
SPBPB2B2.17c
Product
sub-telomeric 5Tm protein family Ftm7
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
Q9HDU0
ORFeome ID
41/41B10
Characterisation status
conserved unknown
Feature type
mRNA gene
Genomic location
chromosome II: 4501956..4502396 reverse strand

Annotation

GO cellular component

GO:0012505 - endomembrane system

References:

Genome organisation

PBO:0000066 - telomeric duplication

Protein features

PBO:0111741 - sub-telomeric 5Tm protein family

Protein sequence feature

SO:0001812 - transmembrane_helix

References:

Quantitative gene expression

PBO:0011963 - RNA level

References:

Taxonomic conservation

PBO:0011065 - conserved in eukaryotes

PBO:0011064 - conserved in fungi

PBO:0011063 - conserved in fungi only

PBO:0000055 - no apparent S. cerevisiae ortholog

Protein features

IDNameInterPro nameDB name
PF09437Pombe_5TM5TM-prot_SCHPOPfam

References / Literature

PMID:11152613 - Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
Krogh A et al. J Mol Biol 2001 Jan 19;305(3):567-80
PMID:22681890 - Hierarchical modularity and the evolution of genetic interactomes across species.
Ryan CJ et al. Mol Cell 2012 Jun 08;46(5):691-704
PMID:16823372 - ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.
Matsuyama A et al. Nat Biotechnol 2006 Jul;24(7):841-7
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83