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protein coding gene - gms1 (SPCC1795.03) - Golgi UDP-galactose transmembrane transporter Gms1

Gene summary

Standard name
gms1
Systematic ID
SPCC1795.03
Product
Golgi UDP-galactose transmembrane transporter Gms1
Organism
Schizosaccharomyces pombe (fission yeast)
Synonyms
gmn3
UniProt ID
P87041
ORFeome ID
19/19G06
Characterisation status
biological role published
Feature type
mRNA gene
Genomic location
chromosome III: 992878..994986 reverse strand

Annotation

Complementation

PBO:0017080 - functionally complements human SLC35A2

References:

Disease association

MONDO:0014248 - autism spectrum disorder - epilepsy - arthrogryposis syndrome

References:

MONDO:0015286 - congenital disorder of glycosylation

References:

MONDO:0010478 - SLC35A2-congenital disorder of glycosylation

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GO biological process

GO:0097624 - UDP-galactose transmembrane import into Golgi lumen

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GO:0072334 - UDP-galactose transmembrane transport

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GO cellular component

GO:0000139 - Golgi membrane

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GO molecular function

GO:0005459 - UDP-galactose transmembrane transporter activity

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Modification

MOD:01148 - ubiquitinylated lysine

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Multi-locus phenotype

FYPO:0006277 - abnormal N-linked glycoprotein glycan structure

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Genotypes:

FYPO:0001355 - decreased vegetative cell population growth

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Genotypes:

FYPO:0002061 - inviable vegetative cell population

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Genotypes:

FYPO:0000106 - sensitive to hygromycin B

References:

Genotypes:

Protein sequence feature

SO:0001812 - transmembrane_helix

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Qualitative gene expression

PomGeneEx:0000018 - protein level increased

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PomGeneEx:0000012 - RNA level decreased

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Quantitative gene expression

PBO:0006310 - protein level

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PBO:0011963 - RNA level

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Single locus phenotype

FYPO:0006278 - abnormal O-linked glycoprotein glycan structure

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Genotypes:

FYPO:0003292 - abnormal UDP-galactose transmembrane transport

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Genotypes:

FYPO:0000010 - abolished cell-substrate adhesion

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Genotypes:

FYPO:0003318 - abolished galactose-specific flocculation during vegetative growth

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Genotypes:

FYPO:0003728 - abolished protein galactosylation during vegetative growth

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Genotypes:

FYPO:0000569 - abolished shmoo formation

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Genotypes:

FYPO:0001203 - coflocculating cells

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Genotypes:

FYPO:0000082 - decreased cell population growth at high temperature

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Genotypes:

FYPO:0001407 - decreased cell population growth on glucose carbon source

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Genotypes:

FYPO:0002163 - decreased cell wall thickness during vegetative growth

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Genotypes:

FYPO:0003354 - decreased galactose level in glycoprotein glycan

References:

Genotypes:

FYPO:0001911 - decreased protein glycosylation during vegetative growth

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Genotypes:

FYPO:0002118 - decreased transporter activity

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Genotypes:

FYPO:0001355 - decreased vegetative cell population growth

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Genotypes:

FYPO:0002629 - galactose absent from cell wall

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Genotypes:

FYPO:0003727 - galactose absent from cell wall glycoprotein glycan

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Genotypes:

FYPO:0003291 - galactose absent from glycoprotein glycan

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Genotypes:

FYPO:0009094 - increased cell population growth on lysine and proline nitrogen source

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Genotypes:

FYPO:0000155 - increased flocculation

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Genotypes:

FYPO:0003319 - increased mannose-specific flocculation

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Genotypes:

FYPO:0001309 - increased viability in stationary phase

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Genotypes:

FYPO:0002630 - irregular cell wall during vegetative growth

References:

Genotypes:

FYPO:0000224 - lemon-shaped cell

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Genotypes:

FYPO:0002343 - normal growth on terbinafine

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Genotypes:

FYPO:0003658 - normal protein localization to Golgi membrane

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Genotypes:

FYPO:0001357 - normal vegetative cell population growth

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Genotypes:

FYPO:0001120 - pear-shaped vegetative cell

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Genotypes:

FYPO:0003657 - protein mislocalized to endoplasmic reticulum during vegetative growth

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Genotypes:

FYPO:0009030 - resistance to amitrole

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Genotypes:

FYPO:0000763 - resistance to cadmium

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Genotypes:

FYPO:0009038 - resistance to egtazic acid

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Genotypes:

FYPO:0002578 - resistance to hydroxyurea

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Genotypes:

FYPO:0009070 - resistance to itraconazole

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Genotypes:

FYPO:0001583 - resistance to lithium

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Genotypes:

FYPO:0009083 - resistance to lithium chloride and methyl methanesulfonate

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Genotypes:

FYPO:0009085 - resistance to lithium chloride and sodium dodecyl sulfate

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Genotypes:

FYPO:0002767 - resistance to terbinafine

References:

Genotypes:

FYPO:0001034 - resistance to tunicamycin

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Genotypes:

FYPO:0001501 - sensitive to brefeldin A

References:

Genotypes:

FYPO:0001190 - sensitive to cell wall-degrading enzymes

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Genotypes:

FYPO:0002640 - sensitive to clotrimazole

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Genotypes:

FYPO:0000104 - sensitive to cycloheximide

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Genotypes:

FYPO:0000799 - sensitive to diamide

References:

Genotypes:

FYPO:0000106 - sensitive to hygromycin B

References:

Genotypes:

FYPO:0009088 - sensitive to magnesium chloride and sodium dodecyl sulfate

References:

Genotypes:

FYPO:0007924 - sensitive to potassium chloride and sodium dodecyl sulfate

References:

Genotypes:

FYPO:0002328 - sensitive to terbinafine

References:

Genotypes:

FYPO:0003656 - sensitive to vanadate

References:

Genotypes:

FYPO:0001234 - slow vegetative cell population growth

References:

Genotypes:

FYPO:0000021 - spheroid vegetative cell

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Genotypes:

FYPO:0000280 - sterile

References:

Genotypes:

FYPO:0003710 - swollen pear-shaped vegetative cell

References:

Genotypes:

FYPO:0002380 - viable spheroid vegetative cell

References:

Genotypes:

FYPO:0002060 - viable vegetative cell population

References:

Genotypes:

FYPO:0002177 - viable vegetative cell with normal cell morphology

References:

Genotypes:

Taxonomic conservation

PBO:0011065 - conserved in eukaryotes

PBO:0011071 - conserved in eukaryotes only

PBO:0011064 - conserved in fungi

PBO:0011069 - conserved in metazoa

PBO:0011070 - conserved in vertebrates

Protein features

IDNameInterPro nameDB name
PF04142Nuc_sug_transpNuc_sug_transptPFAM
SSF103481Multidrug resistance efflux transporter EmrEEmrE-likeSUPERFAMILY
PTHR10231NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTERNuc_sug_transptPANTHER
PIRSF005799UDP-gal_transptNuc_sug_transptPIRSF
mobidb-lite-Disorderdisorder_predictionMOBIDB-Disorder
mobidb-lite-Polardisorder_predictionMOBIDB-Polar
TIGR00803nstNCBIFAM

Orthologs

References / Literature

PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:32918581 - Golgi localization of glycosyltransferases requires Gpp74p in Schizosaccharomyces pombe.
Ohashi T et al. Appl Microbiol Biotechnol 2020 Oct;104(20):8897-8909
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:33109728 - High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library.
Varberg JM et al. G3 (Bethesda) 2020 Dec 03;10(12):4649-4663
PMID:19942659 - Characterization of two different types of UDP-glucose/-galactose 4-epimerase involved in galactosylation in fission yeast.
Suzuki S et al. Microbiology (Reading) 2010 Mar;156(Pt 3):708-718
PMID:21098516 - Structural analysis of α1,3-linked galactose-containing oligosaccharides in Schizosaccharomyces pombe mutants harboring single and multiple α-galactosyltransferase genes disruptions.
Ohashi T et al. Glycobiology 2011 Mar;21(3):340-51
PMID:22252817 - A genomewide screen in Schizosaccharomyces pombe for genes affecting the sensitivity of antifungal drugs that target ergosterol biosynthesis.
Fang Y et al. Antimicrob Agents Chemother 2012 Apr;56(4):1949-59
PMID:39367033 - Quantitative proteomics and phosphoproteomics profiling of meiotic divisions in the fission yeast Schizosaccharomyces pombe.
Sivakova B et al. Sci Rep 2024 Oct 04;14(1):23105
PMID:25378562 - Vsl1p cooperates with Fsv1p for vacuolar protein transport and homotypic fusion in Schizosaccharomyces pombe.
Hosomi A et al. Microbiology (Reading) 2015 Jan;161(Pt 1):89-98
PMID:9125114 - The Schizosaccharomyces pombe gms1+ gene encodes an UDP-galactose transporter homologue required for protein galactosylation.
Tabuchi M et al. Biochem Biophys Res Commun 1997 Mar 06;232(1):121-5
PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PB_REF:0000006 - Disease associations from Monarch via human-pombe orthologs
PMID:37970674 - SUMOylation regulates Lem2 function in centromere clustering and silencing.
Strachan J et al. J Cell Sci 2023 Dec 01;136(23)
PMID:24763107 - Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).
Carpy A et al. Mol Cell Proteomics 2014 Aug;13(8):1925-36
PMID:22988247 - Identification of novel α1,3-galactosyltransferase and elimination of α-galactose-containing glycans by disruption of multiple α-galactosyltransferase genes in Schizosaccharomyces pombe.
Ohashi T et al. J Biol Chem 2012 Nov 09;287(46):38866-75
PMID:28357272 - A central role for TOR signalling in a yeast model for juvenile CLN3 disease.
Bond ME et al. Microb Cell 2015 Nov 11;2(12):466-480
PMID:39705284 - Proteomic and phosphoproteomic analyses reveal that TORC1 is reactivated by pheromone signaling during sexual reproduction in fission yeast.
Bérard M et al. PLoS Biol 2024 Dec 20;22(12):e3002963
PMID:8782411 - Isolation and characterization of a glycosylation mutant from Schizosaccharomyces pombe.
Takegawa K et al. Biosci Biotechnol Biochem 1996 Jul;60(7):1156-9
PMID:34389684 - Genetic screen for suppression of transcriptional interference identifies a gain-of-function mutation in Pol2 termination factor Seb1.
Schwer B et al. Proc Natl Acad Sci U S A 2021 Aug 17;118(33)
PMID:11693916 - Coflocculation of Escherichia coli and Schizosaccharomyces pombe.
Peng X et al. Appl Microbiol Biotechnol 2001 Oct;57(1-2):175-81
PMID:35820914 - Antagonistic effects of mitochondrial matrix and intermembrane space proteases on yeast aging.
Vega M et al. BMC Biol 2022 Jul 12;20(1):160
PMID:11378902 - Functional characterization of Gms1p/UDP-galactose transporter in Schizosaccharomyces pombe.
Tanaka N et al. Yeast 2001 Jun;18(8):745-57
PB_REF:0000003 - Disease Association Curation
PMID:11447596 - Characterization of a Schizosaccharomyces pombe mutant deficient in UDP-galactose transport activity.
Tanaka N et al. Yeast 2001 Jul;18(10):903-14
PMID:22098069 - Identification of a galactose-specific flocculin essential for non-sexual flocculation and filamentous growth in Schizosaccharomyces pombe.
Matsuzawa T et al. Mol Microbiol 2011 Dec;82(6):1531-44
PMID:22681890 - Hierarchical modularity and the evolution of genetic interactomes across species.
Ryan CJ et al. Mol Cell 2012 Jun 08;46(5):691-704
PMID:10371208 - Schizosaccharomyces pombe UDP-galactose transporter: identification of its functional form through cDNA cloning and expression in mammalian cells.
Segawa H et al. FEBS Lett 1999 May 28;451(3):295-8
PMID:23254763 - Ght2⁺ is required for UDP-galactose synthesis from extracellular galactose by Schizosaccharomyces pombe.
Matsuzawa T et al. Appl Microbiol Biotechnol 2013 Jun;97(11):4957-64
PMID:27587357 - The conundrum of UDP-Glc entrance into the yeast ER lumen.
Bredeston LM et al. Glycobiology 2017 Jan;27(1):64-79
PMID:37787768 - Broad functional profiling of fission yeast proteins using phenomics and machine learning.
Rodríguez-López M et al. Elife 2023 Oct 03;12
PMID:19202278 - The och1 mutant of Schizosaccharomyces pombe produces galactosylated core structures of N-linked oligosaccharides.
Ohashi T et al. Biosci Biotechnol Biochem 2009 Feb;73(2):407-14
PMID:40015273 - A comprehensive Schizosaccharomyces pombe atlas of physical transcription factor interactions with proteins and chromatin.
Skribbe M et al. Mol Cell 2025 Feb 19;
PMID:11152613 - Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
Krogh A et al. J Mol Biol 2001 Jan 19;305(3):567-80
PMID:19844703 - N- and O-linked oligosaccharides completely lack galactose residues in the gms1och1 mutant of Schizosaccharomyces pombe.
Ohashi T et al. Appl Microbiol Biotechnol 2010 Mar;86(1):263-72
PMID:33313903 - Ribosome profiling reveals ribosome stalling on tryptophan codons and ribosome queuing upon oxidative stress in fission yeast.
Rubio A et al. Nucleic Acids Res 2021 Jan 11;49(1):383-399
PMID:11472912 - Decrease in cell surface galactose residues of Schizosaccharomyces pombe enhances its coflocculation with Pediococcus damnosus.
Peng X et al. Appl Environ Microbiol 2001 Aug;67(8):3413-7
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053