protein coding gene - SPCC1795.12c - Schizosaccharomyces specific protein, GPI anchored
Gene summary
Systematic ID
SPCC1795.12c
Product
Schizosaccharomyces specific protein, GPI anchored
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
O59776
ORFeome ID
02/02A05
Characterisation status
Schizosaccharomyces specific protein, uncharacterized
Feature type
mRNA gene
Genomic location
chromosome III: 972777..973891 forward strand
Annotation
GO cellular component
GO:0005737
-
cytoplasm
References:
PMID:16823372
GO:0005783
-
endoplasmic reticulum
References:
PMID:16823372
GO:0005794
-
Golgi apparatus
References:
PMID:16823372
Modification
MOD:00818
-
glycosylphosphatidylinositolated residue
References:
PB_REF:0000007
MOD:00046
-
O-phospho-L-serine
References:
PMID:18257517
PMID:21712547
PMID:25720772
PMID:29996109
PMID:30726745
PMID:33823663
Protein sequence feature
SO:0001812
-
transmembrane_helix
References:
PMID:11152613
Qualitative gene expression
PomGeneEx:0000012
-
RNA level decreased
References:
PMID:16537923
PMID:33313903
Quantitative gene expression
PBO:0011963
-
RNA level
References:
PMID:23101633
Single locus phenotype
FYPO:0002060
-
viable vegetative cell population
References:
PMID:20473289
PMID:23697806
Genotypes:
SPCC1795.12cdelta
FYPO:0002177
-
viable vegetative cell with normal cell morphology
References:
PMID:23697806
Genotypes:
SPCC1795.12cdelta
Taxonomic conservation
PBO:0016885
-
Schizosaccharomyces specific
Warnings
PBO:0000199
-
previously annotated as dubious
Protein features
ID
Name
InterPro name
DB name
Transmembrane alpha helix
DeepTMHMM
Orthologs
SJAG_00787 Schizosaccharomyces japonicus
References / Literature
PMID:33109728
-
High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library.
Varberg JM et al. G3 (Bethesda) 2020 Dec 03;10(12):4649-4663
PMID:18257517
-
Phosphoproteome analysis of fission yeast.
Wilson-Grady JT et al. J Proteome Res 2008 Mar;7(3):1088-97
PMID:33313903
-
Ribosome profiling reveals ribosome stalling on tryptophan codons and ribosome queuing upon oxidative stress in fission yeast.
Rubio A et al. Nucleic Acids Res 2021 Jan 11;49(1):383-399
PMID:26771498
-
A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human.
Vo TV et al. Cell 2016 Jan 14;164(1-2):310-323
PMID:21511999
-
Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PB_REF:0000007
-
Prediction of GPI-anchored proteins with pointer neural networks
PMID:23101633
-
Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:16537923
-
Sterol regulatory element binding protein is a principal regulator of anaerobic gene expression in fission yeast.
Todd BL et al. Mol Cell Biol 2006 Apr;26(7):2817-31
PMID:20118936
-
Schizosaccharomyces pombe genome-wide nucleosome mapping reveals positioning mechanisms distinct from those of Saccharomyces cerevisiae.
Lantermann AB et al. Nat Struct Mol Biol 2010 Feb;17(2):251-7
PMID:20473289
-
Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PMID:21712547
-
Mitotic substrates of the kinase aurora with roles in chromatin regulation identified through quantitative phosphoproteomics of fission yeast.
Koch A et al. Sci Signal 2011 Jun 28;4(179):rs6
PMID:23163955
-
Analysis of stress-induced duplex destabilization (SIDD) properties of replication origins, genes and intergenes in the fission yeast, Schizosaccharomyces pombe.
Yadav MP et al. BMC Res Notes 2012 Nov 19;5:643
PMID:29996109
-
Quantitative Phosphoproteomics Reveals the Signaling Dynamics of Cell-Cycle Kinases in the Fission Yeast Schizosaccharomyces pombe.
Swaffer MP et al. Cell Rep 2018 Jul 10;24(2):503-514
PMID:33823663
-
A TOR (target of rapamycin) and nutritional phosphoproteome of fission yeast reveals novel targets in networks conserved in humans.
Halova L et al. Open Biol 2021 Apr;11(4):200405
PMID:25720772
-
Quantitative phosphoproteomics reveals pathways for coordination of cell growth and division by the conserved fission yeast kinase pom1.
Kettenbach AN et al. Mol Cell Proteomics 2015 May;14(5):1275-87
PMID:30726745
-
Fission Yeast NDR/LATS Kinase Orb6 Regulates Exocytosis via Phosphorylation of the Exocyst Complex.
Tay YD et al. Cell Rep 2019 Feb 05;26(6):1654-1667.e7
PMID:11152613
-
Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
Krogh A et al. J Mol Biol 2001 Jan 19;305(3):567-80
PMID:23697806
-
A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053
PMID:16823372
-
ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.
Matsuyama A et al. Nat Biotechnol 2006 Jul;24(7):841-7