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protein coding gene - pca1 (SPCC1840.04) - metacaspase Pca1

Gene summary

Standard name
pca1
Systematic ID
SPCC1840.04
Product
metacaspase Pca1
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
O74477
ORFeome ID
24/24A08
Characterisation status
biological role published
Feature type
mRNA gene
Genomic location
chromosome III: 2263967..2267305 forward strand

Annotation

GO biological process

GO:0006515 - protein quality control for misfolded or incompletely synthesized proteins

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GO cellular component

GO:0005737 - cytoplasm

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GO:0005829 - cytosol

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GO:0005634 - nucleus

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GO molecular function

GO:0004197 - cysteine-type endopeptidase activity

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Multi-locus phenotype

FYPO:0004168 - normal viability in stationary phase during glucose starvation

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Genotypes:

Qualitative gene expression

PomGeneEx:0000011 - RNA level increased

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Quantitative gene expression

PBO:0006310 - protein level

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PBO:0011963 - RNA level

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Single locus phenotype

FYPO:0001669 - abolished protein processing during vegetative growth

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Genotypes:

FYPO:0005285 - decreased cysteine-type endopeptidase activity

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Genotypes:

FYPO:0000637 - increased cell population growth rate on glucose carbon source

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Genotypes:

FYPO:0004129 - increased cysteine-type peptidase activity

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Genotypes:

FYPO:0005283 - increased viability upon inositol starvation

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Genotypes:

FYPO:0002004 - microtubules absent from cell

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Genotypes:

FYPO:0001686 - normal growth on carbendazim

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Genotypes:

FYPO:0000964 - normal growth on thiabendazole

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Genotypes:

FYPO:0002618 - normal growth on valproic acid

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Genotypes:

FYPO:0003702 - normal microtubule cytoskeleton morphology during vegetative growth

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Genotypes:

FYPO:0009066 - resistance to amorolfine

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Genotypes:

FYPO:0000763 - resistance to cadmium

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Genotypes:

FYPO:0000764 - resistance to cycloheximide

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Genotypes:

FYPO:0002693 - resistance to diamide

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Genotypes:

FYPO:0001103 - resistance to hydrogen peroxide

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Genotypes:

FYPO:0009070 - resistance to itraconazole

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Genotypes:

FYPO:0009087 - resistance to magnesium chloride and sodium dodecyl sulfate

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Genotypes:

FYPO:0000725 - resistance to methyl methanesulfonate

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Genotypes:

FYPO:0009043 - resistance to potassium chloride and sodium dodecyl sulfate

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Genotypes:

FYPO:0003113 - resistance to sodium nitroprusside

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Genotypes:

FYPO:0003383 - resistance to tert-butyl hydroperoxide

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Genotypes:

FYPO:0000830 - resistance to vanadate

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Genotypes:

FYPO:0007931 - sensitive to egtazic acid

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Genotypes:

FYPO:0002328 - sensitive to terbinafine

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Genotypes:

FYPO:0001457 - sensitive to tunicamycin

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Genotypes:

FYPO:0003656 - sensitive to vanadate

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Genotypes:

FYPO:0002060 - viable vegetative cell population

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Genotypes:

FYPO:0002177 - viable vegetative cell with normal cell morphology

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Genotypes:

Taxonomic conservation

PBO:0011065 - conserved in eukaryotes

PBO:0011071 - conserved in eukaryotes only

PBO:0011064 - conserved in fungi

Protein features

IDNameInterPro nameDB name
PF00656Peptidase_C14Pept_C14_caspasePFAM
G3DSA:3.40.50.12660:FF:000005FUNFAM
SSF52129Caspase-likeCaspase-like_dom_sfSUPERFAMILY
G3DSA:3.40.50.12660GENE3D
PTHR48104METACASPASE-4MetacaspasePANTHER
mobidb-lite-Disorderdisorder_predictionMOBIDB-Disorder
mobidb-lite-Low-complexitydisorder_predictionMOBIDB-Low-complexity
mobidb-lite-Polardisorder_predictionMOBIDB-Polar

Orthologs

References / Literature

PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:19606215 - Calnexin regulates apoptosis induced by inositol starvation in fission yeast.
Guérin R et al. PLoS One 2009 Jul 16;4(7):e6244
PMID:21670521 - Apoptotic cell death in the fission yeast Schizosaccharomyces pombe induced by valproic acid and its extreme susceptibility to pH change.
Mutoh N et al. Biosci Biotechnol Biochem 2011;75(6):1113-8
PMID:12597774 - Characterization of SUMO-conjugating enzyme mutants in Schizosaccharomyces pombe identifies a dominant-negative allele that severely reduces SUMO conjugation.
Ho JC et al. Biochem J 2003 May 15;372(Pt 1):97-104
PMID:23697806 - A genome-wide resource of cell cycle and cell shape genes of fission yeast.
Hayles J et al. Open Biol 2013 May 22;3(5):130053
PMID:37787768 - Broad functional profiling of fission yeast proteins using phenomics and machine learning.
Rodríguez-López M et al. Elife 2023 Oct 03;12
PMID:29432178 - General amino acid control in fission yeast is regulated by a nonconserved transcription factor, with functions analogous to Gcn4/Atf4.
Duncan CDS et al. Proc Natl Acad Sci U S A 2018 Feb 20;115(8):E1829-E1838
PMID:16823372 - ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.
Matsuyama A et al. Nat Biotechnol 2006 Jul;24(7):841-7
PMID:18931302 - Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes.
Dixon SJ et al. Proc Natl Acad Sci U S A 2008 Oct 28;105(43):16653-8
PMID:15797925 - The nuclear rim protein Amo1 is required for proper microtubule cytoskeleton organisation in fission yeast.
Pardo M et al. J Cell Sci 2005 Apr 15;118(Pt 8):1705-14
PMID:17898859 - Overexpression of a metacaspase gene stimulates cell growth and stress response in Schizosaccharomyces pombe.
Lim HW et al. Can J Microbiol 2007 Aug;53(8):1016-23
PMID:16491466 - Construction of a protease-deficient strain set for the fission yeast Schizosaccharomyces pombe, useful for effective production of protease-sensitive heterologous proteins.
Idiris A et al. Yeast 2006 Jan 30;23(2):83-99
PMID:20473289 - Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe.
Kim DU et al. Nat Biotechnol 2010 Jun;28(6):617-623
PMID:32347926 - Involvement of Pca1 in ROS-mediated apoptotic cell death induced by alpha-thujone in the fission yeast (Schizosaccharomyces pombe).
Agus HH et al. FEMS Yeast Res 2020 Jun 01;20(4)
PMID:22681890 - Hierarchical modularity and the evolution of genetic interactomes across species.
Ryan CJ et al. Mol Cell 2012 Jun 08;46(5):691-704
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:18653539 - Caspase-dependent and -independent lipotoxic cell-death pathways in fission yeast.
Low CP et al. J Cell Sci 2008 Aug 15;121(Pt 16):2671-84
GO_REF:0000024 - Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity.