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protein coding gene - SPCC622.03c - Schizosaccharomyces pombe specific protein

Gene summary

Systematic ID
SPCC622.03c
Product
Schizosaccharomyces pombe specific protein
Organism
Schizosaccharomyces pombe (fission yeast)
UniProt ID
O94593
ORFeome ID
42/42A11
Characterisation status
Schizosaccharomyces pombe specific protein, uncharacterized
Feature type
mRNA gene
Genomic location
chromosome III: 1404867..1406367 reverse strand

Annotation

GO cellular component

GO:0005737 - cytoplasm

References:

Modification

MOD:01148 - ubiquitinylated lysine

References:

Protein sequence feature

SO:0001812 - transmembrane_helix

References:

Qualitative gene expression

PomGeneEx:0000011 - RNA level increased

References:

Quantitative gene expression

PBO:0011963 - RNA level

References:

Taxonomic conservation

PBO:0016878 - Schizosaccharomyces pombe specific

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Warnings

PBO:0000497 - ORF in compositionally biased region

PBO:0000199 - previously annotated as dubious

PBO:0091685 - translated non-conserved ORF in low complexity region

References:

Protein features

IDNameInterPro nameDB name
Transmembrane alpha helixDeepTMHMM

References / Literature

PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:24929437 - The translational landscape of fission-yeast meiosis and sporulation.
Duncan CD et al. Nat Struct Mol Biol 2014 Jul;21(7):641-7
PMID:22681890 - Hierarchical modularity and the evolution of genetic interactomes across species.
Ryan CJ et al. Mol Cell 2012 Jun 08;46(5):691-704
PMID:22907753 - Posttranscriptional regulation of cell-cell interaction protein-encoding transcripts by Zfs1p in Schizosaccharomyces pombe.
Wells ML et al. Mol Cell Biol 2012 Oct;32(20):4206-14
PMID:11152613 - Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
Krogh A et al. J Mol Biol 2001 Jan 19;305(3):567-80
PMID:37970674 - SUMOylation regulates Lem2 function in centromere clustering and silencing.
Strachan J et al. J Cell Sci 2023 Dec 01;136(23)
PMID:12161753 - The transcriptional program of meiosis and sporulation in fission yeast.
Mata J et al. Nat Genet 2002 Sep;32(1):143-7
PMID:16823372 - ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe.
Matsuyama A et al. Nat Biotechnol 2006 Jul;24(7):841-7