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lncRNA gene - SPNCRNA.1642 - non-coding RNA

Gene summary

Systematic ID
SPNCRNA.1642
Product
non-coding RNA
Organism
Schizosaccharomyces pombe (fission yeast)
Synonyms
SPBC21C3.07c-antisense-1
Feature type
lncRNA gene
Genomic location
chromosome II: 3808058..3809101 forward strand

Annotation

Quantitative gene expression

PBO:0011963 - RNA level

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Single locus phenotype

FYPO:0009028 - increased cell population growth on proline nitrogen source

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Genotypes:

FYPO:0001029 - resistance to canavanine

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Genotypes:

FYPO:0002578 - resistance to hydroxyurea

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Genotypes:

FYPO:0000725 - resistance to methyl methanesulfonate

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Genotypes:

FYPO:0005266 - resistance to sodium dodecyl sulfate

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FYPO:0007808 - resistance to valproic acid

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References / Literature

PMID:29914874 - Long noncoding RNA repertoire and targeting by nuclear exosome, cytoplasmic exonuclease, and RNAi in fission yeast.
Atkinson SR et al. RNA 2018 Sep;24(9):1195-1213
PMID:34984977 - Functional profiling of long intergenic non-coding RNAs in fission yeast.
Rodriguez-Lopez M et al. Elife 2022 Jan 05;11
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:40015273 - A comprehensive Schizosaccharomyces pombe atlas of physical transcription factor interactions with proteins and chromatin.
Skribbe M et al. Mol Cell 2025 Feb 19;
PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6