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lncRNA gene - SPNCRNA.282 - non-coding RNA

Gene summary

Systematic ID
SPNCRNA.282
Product
non-coding RNA
Organism
Schizosaccharomyces pombe (fission yeast)
Synonyms
SPNG1070
Feature type
lncRNA gene
Genomic location
chromosome I: 5517028..5517494 forward strand

Annotation

Quantitative gene expression

PBO:0011963 - RNA level

References:

Single locus phenotype

FYPO:0009022 - decreased cell population growth on isoleucine nitrogen source

References:

Genotypes:

FYPO:0009008 - increased vegetative cell population viability

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Genotypes:

FYPO:0004163 - increased viability upon glucose starvation

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Genotypes:

FYPO:0000725 - resistance to methyl methanesulfonate

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Genotypes:

FYPO:0000089 - sensitive to methyl methanesulfonate

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Genotypes:

Warnings

PBO:0000063 - no detectable long open reading frame

PBO:0006231 - this transcript could be on either strand

References / Literature

PMID:29914874 - Long noncoding RNA repertoire and targeting by nuclear exosome, cytoplasmic exonuclease, and RNAi in fission yeast.
Atkinson SR et al. RNA 2018 Sep;24(9):1195-1213
PMID:18488015 - Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution.
Wilhelm BT et al. Nature 2008 Jun 26;453(7199):1239-43
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:40015273 - A comprehensive Schizosaccharomyces pombe atlas of physical transcription factor interactions with proteins and chromatin.
Skribbe M et al. Mol Cell 2025 Feb 19;
PMID:34984977 - Functional profiling of long intergenic non-coding RNAs in fission yeast.
Rodriguez-Lopez M et al. Elife 2022 Jan 05;11