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lncRNA gene - lncRNA584 (SPNCRNA.584) - meiosis specific Smp foci lncRNA

Gene summary

Standard name
lncRNA584
Systematic ID
SPNCRNA.584
Product
meiosis specific Smp foci lncRNA
Organism
Schizosaccharomyces pombe (fission yeast)
Synonyms
SPNG2AF58, SPNCRNA.1274, SPCC1919.05-antisense-2
Feature type
lncRNA gene
Genomic location
chromosome III: 2215633..2217861 reverse strand

Annotation

GO cellular component

GO:0033620 - Mei2 nuclear dot complex

References:

Qualitative gene expression

PomGeneEx:0000011 - RNA level increased

References:

Quantitative gene expression

PBO:0011963 - RNA level

References:

Single locus phenotype

FYPO:0007354 - normal homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3

References:

Genotypes:

FYPO:0007356 - normal Smp focus formation

References:

Genotypes:

References / Literature

PMID:26670050 - Regulation of mRNA Levels by Decay-Promoting Introns that Recruit the Exosome Specificity Factor Mmi1.
Kilchert C et al. Cell Rep 2015 Dec 22;13(11):2504-2515
PMID:21511999 - Comparative functional genomics of the fission yeasts.
Rhind N et al. Science 2011 May 20;332(6032):930-6
PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.
Marguerat S et al. Cell 2012 Oct 26;151(3):671-83
PMID:27984744 - Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs.
Joh RI et al. Mol Cell 2016 Dec 15;64(6):1088-1101
PMID:18488015 - Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution.
Wilhelm BT et al. Nature 2008 Jun 26;453(7199):1239-43
PMID:29914874 - Long noncoding RNA repertoire and targeting by nuclear exosome, cytoplasmic exonuclease, and RNAi in fission yeast.
Atkinson SR et al. RNA 2018 Sep;24(9):1195-1213
PMID:31811152 - Chromosome-associated RNA-protein complexes promote pairing of homologous chromosomes during meiosis in Schizosaccharomyces pombe.
Ding DQ et al. Nat Commun 2019 Dec 06;10(1):5598