snRNA gene - snu5 (SPSNRNA.05) - small nuclear RNA U5

Gene summary

Standard name

snu5

Systematic ID

SPSNRNA.05

Product

small nuclear RNA U5

Organism

Schizosaccharomyces pombe (fission yeast)

Feature type

snRNA gene

Genomic location

chromosome II: 3236867..3236986 forward strand

Annotation

References / Literature

PMID:2587274 - Sequence and structure of U5 snRNA from Schizosaccharomyces pombe.

Small K et al. Nucleic Acids Res 1989 Nov 25;17(22):9483

PMID:12374752 - Pre-spliceosome formation in S.pombe requires a stable complex of SF1-U2AF(59)-U2AF(23).

Huang T et al. EMBO J 2002 Oct 15;21(20):5516-26

PMID:23101633 - Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.

Marguerat S et al. Cell 2012 Oct 26;151(3):671-83

PMID:10445882 - Pac1p, an RNase III homolog, is required for formation of the 3' end of U2 snRNA in Schizosaccharomyces pombe.

Zhou D et al. RNA 1999 Aug;5(8):1083-98

PMID:2953599 - Fungal small nuclear ribonucleoproteins share properties with plant and vertebrate U-snRNPs.

Tollervey D et al. EMBO J 1987 Feb;6(2):469-76

PMID:34352089 - Co-transcriptional RNA cleavage by Drosha homolog Pac1 triggers transcription termination in fission yeast.

Yague-Sanz C et al. Nucleic Acids Res 2021 Sep 07;49(15):8610-8624

GO_REF:0000024 - Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity.

PMID:26292707 - Structure of a yeast spliceosome at 3.6-angstrom resolution.

Yan C et al. Science 2015 Sep 11;349(6253):1182-91

PMID:23754748 - Splicing functions and global dependency on fission yeast slu7 reveal diversity in spliceosome assembly.

Banerjee S et al. Mol Cell Biol 2013 Aug;33(16):3125-36

PMID:10409726 - Myb-related fission yeast cdc5p is a component of a 40S snRNP-containing complex and is essential for pre-mRNA splicing.

McDonald WH et al. Mol Cell Biol 1999 Aug;19(8):5352-62

PMID:33754639 - Identification and structural analysis of the Schizosaccharomyces pombe SMN complex.

Veepaschit J et al. Nucleic Acids Res 2021 Jul 21;49(13):7207-7223

PMID:2144896 - Immunoprecipitation distinguishes non-overlapping groups of snRNPs in Schizosaccharomyces pombe.

Tollervey D et al. Nucleic Acids Res 1990 Sep 11;18(17):5207-12

PMID:20400941 - Specific splicing defects in S. pombe carrying a degron allele of the Survival of Motor Neuron gene.

Campion Y et al. EMBO J 2010 Jun 02;29(11):1817-29

PMID:17284461 - Biochemical and genetic analysis of RNA cap guanine-N2 methyltransferases from Giardia lamblia and Schizosaccharomyces pombe.

Hausmann S et al. Nucleic Acids Res 2007;35(5):1411-20

PMID:8809017 - Localization of modified nucleotides in Schizosaccharomyces pombe spliceosomal small nuclear RNAs: modified nucleotides are clustered in functionally important regions.

Gu J et al. RNA 1996 Sep;2(9):909-18

PMID:2192258 - Differential distribution of factors involved in pre-mRNA processing in the yeast cell nucleus.

Potashkin JA et al. Mol Cell Biol 1990 Jul;10(7):3524-34