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Haploid genotype - clr4delta

Genotype summary

Description
clr4delta
Organism
Schizosaccharomyces pombe (fission yeast)

Allele summary

gene Product Allele name Description Type Expression
clr4 (SPBC428.08c)histone lysine H3-K9 methyltransferase (Suv39) Clr4clr4deltadeletiondeletionNull

Annotation

Single locus phenotype

FYPO:0000156 - abnormal chromatin silencing at silent mating-type cassette

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FYPO:0003659 - abnormal mating type switching resulting in duplication or deletion in mating-type region

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FYPO:0004276 - abnormal negative regulation of transcription during G0

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FYPO:0000855 - abnormal nucleosome positioning in heterochromatin

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FYPO:0000443 - abnormal protein localization during vegetative growth

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FYPO:0001131 - abnormal protein localization to heterochromatin during vegetative growth

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FYPO:0003066 - abnormal sporulation resulting in formation of ascus with fewer than four spores

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FYPO:0007334 - abolished chromatin silencing at centromere outer repeat

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FYPO:0004170 - abolished histone H3-K9 dimethylation at centromere during vegetative growth

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FYPO:0005554 - abolished histone H3-K9 dimethylation at centromere inner repeat during vegetative growth

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FYPO:0004745 - abolished histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

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FYPO:0010028 - abolished histone H3-K9 dimethylation at rDNA during vegetative growth

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FYPO:0004136 - abolished histone H3-K9 dimethylation at telomere during vegetative growth

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FYPO:0003097 - abolished histone H3-K9 methylation at centromere outer repeat during vegetative growth

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FYPO:0008212 - abolished histone H3-K9 methylation at silent mating-type cassette during vegetative growth

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FYPO:0006813 - abolished histone H3-K9 trimethylation at centromere inner repeat during vegetative growth

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FYPO:0005843 - abolished histone H3-K9 trimethylation at centromere outer repeat during vegetative growth

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FYPO:0004312 - abolished protein localization to CENP-A containing chromatin

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FYPO:0000634 - abolished protein localization to centromere during vegetative growth

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FYPO:0003744 - abolished protein localization to centromeric chromatin during vegetative growth

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FYPO:0008153 - abolished protein localization to heterochromatin at silent mating-type cassette during vegetative growth

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FYPO:0001132 - abolished protein localization to heterochromatin during vegetative growth

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FYPO:0003074 - abolished protein localization to pericentric heterochromatin during vegetative growth

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FYPO:0003109 - abolished protein localization to telomere during vegetative growth

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FYPO:0000705 - abolished protein-protein interaction

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FYPO:0008011 - abolished siRNA loading onto RITS complex

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FYPO:0002835 - centromeric outer repeat transcript-derived siRNA absent

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FYPO:0004201 - decreased centromeric outer repeat transcript-derived siRNA level

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FYPO:0006684 - decreased centromeric transcript binding

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FYPO:0002834 - decreased chromatin silencing at centromere

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FYPO:0003411 - decreased chromatin silencing at centromere inner repeat

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FYPO:0006993 - decreased chromatin silencing at centromere otr1R

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FYPO:0003412 - decreased chromatin silencing at centromere outer repeat

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FYPO:0002827 - decreased chromatin silencing at silent mating-type cassette

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FYPO:0004604 - decreased chromatin silencing at subtelomere

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FYPO:0003352 - decreased DNA double-strand break formation at mating-type locus

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FYPO:0003101 - decreased heterochromatin assembly at protein coding gene

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FYPO:0007009 - decreased heterochromatin assembly by small RNA

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FYPO:0002609 - decreased histone H2A phosphorylation at centromere outer repeat during vegetative growth

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FYPO:0002611 - decreased histone H2A phosphorylation at subtelomeric heterochromatin during mitotic S phase

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FYPO:0000888 - decreased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

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FYPO:0007213 - decreased histone H3-K9 dimethylation at heterochromatin island during vegetative growth

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FYPO:0006269 - decreased histone H3-K9 dimethylation at protein coding gene during vegetative growth

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FYPO:0007642 - decreased histone H3-K9 dimethylation at rDNA during G0

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FYPO:0002355 - decreased histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth

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FYPO:0003096 - decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth

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FYPO:0003571 - decreased histone H3-K9 methylation at silent mating-type cassette during vegetative growth

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FYPO:0003572 - decreased histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth

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FYPO:0000890 - decreased histone H3-K9 trimethylation at centromere outer repeat during vegetative growth

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FYPO:0005845 - decreased histone H3-K9 trimethylation at silent mating-type cassette during vegetative growth

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FYPO:0000708 - decreased mating efficiency

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FYPO:0000470 - decreased mating type switching

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FYPO:0005931 - decreased nucleosome occupancy at silent mating-type cassette

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FYPO:0004313 - decreased protein localization to CENP-A containing chromatin

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FYPO:0000450 - decreased protein localization to centromere during vegetative growth

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FYPO:0002842 - decreased protein localization to centromere outer repeat

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FYPO:0006599 - decreased protein localization to centromeric chromatin during vegetative growth

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FYPO:0006631 - decreased protein localization to chromatin

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FYPO:0002391 - decreased protein localization to chromatin at rDNA

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FYPO:0002474 - decreased protein localization to double-strand break site

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FYPO:0003573 - decreased protein localization to heterochromatin at silent mating-type cassette

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FYPO:0002386 - decreased protein localization to pericentric heterochromatin at centromere outer repeat region

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FYPO:0005918 - decreased protein localization to subtelomeric heterochromatin

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FYPO:0002387 - decreased protein localization to subtelomeric heterochromatin during vegetative growth

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FYPO:0001645 - decreased protein-protein interaction

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FYPO:0002624 - decreased punctate nuclear protein localization

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FYPO:0008369 - decreased silent mating type cassette heterochromatin tethering to nuclear periphery during vegetative growth

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FYPO:0004205 - decreased siRNA level

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FYPO:0000581 - decreased spore germination frequency

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FYPO:0007322 - decreased stress granule assembly during cellular response to heat

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0002649 - elongated kinetochore during mitosis

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FYPO:0002019 - elongated telomeres during vegetative growth

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FYPO:0003045 - heterochromatin assembly beyond boundary element IRC1R

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FYPO:0003557 - increased antisense RNA level

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FYPO:0005258 - increased cell population growth at high temperature

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FYPO:0003938 - increased cell population growth during glucose starvation

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FYPO:0009077 - increased cell population growth on ethanol carbon source

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FYPO:0005261 - increased cell population growth on galactose carbon source

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FYPO:0009101 - increased cell population growth on glycerol and galactose carbon source

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FYPO:0004167 - increased cell population growth on glycerol carbon source

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FYPO:0009094 - increased cell population growth on lysine and proline nitrogen source

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FYPO:0009093 - increased cell population growth on lysine and serine nitrogen source

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FYPO:0009072 - increased cell population growth on lysine nitrogen source

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FYPO:0009098 - increased cell population growth on mannitol carbon source

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FYPO:0009028 - increased cell population growth on proline nitrogen source

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FYPO:0009074 - increased cell population growth on serine nitrogen source

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FYPO:0009096 - increased cell population growth on xylose carbon source

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FYPO:0004689 - increased cenH-derived RNA level

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FYPO:0000220 - increased centromeric outer repeat transcript level

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FYPO:0001740 - increased gross chromosomal rearrangement

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FYPO:0004761 - increased histone exchange at pericentric heterochromatin

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FYPO:0006815 - increased histone H3-K14 acetylation at centromere inner repeat during vegetative growth

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FYPO:0000966 - increased histone H3-K14 acetylation at centromere outer repeat during vegetative growth

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FYPO:0002331 - increased histone H3-K4 dimethylation at centromere outer repeat during vegetative growth

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FYPO:0002369 - increased histone H3-K56 acetylation at centromere outer repeat during vegetative growth

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FYPO:0000893 - increased histone H3-K9 acetylation at centromere during vegetative growth

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FYPO:0006681 - increased histone H3-K9 acetylation at centromere inner repeat during vegetative growth

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FYPO:0006814 - increased histone H3-K9 acetylation at centromere outer repeat during vegetative growth

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FYPO:0007468 - increased histone H3-K9 dimethylation during G0

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FYPO:0010014 - increased histone H3-K9 monomethylation during vegetative growth

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FYPO:0007310 - increased histone H4-K12 acetylation at centromere outer repeat during vegetative growth

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FYPO:0007311 - increased histone H4-K16 acetylation at centromere outer repeat during vegetative growth

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FYPO:0005535 - increased histone H4-K16 acetylation at telomere during vegetative growth

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FYPO:0007308 - increased histone H4-K5 acetylation at centromere outer repeat during vegetative growth

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FYPO:0007309 - increased histone H4-K8 acetylation at centromere outer repeat during vegetative growth

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FYPO:0001742 - increased isochromosome formation

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FYPO:0002354 - increased level of heterochromatin-encoded proteins

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FYPO:0002664 - increased level of stress responsive gene mRNA during vegetative growth

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FYPO:0001840 - increased minichromosome loss during vegetative growth

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FYPO:0001974 - increased number of cells with 1C DNA content

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FYPO:0007227 - increased number of R-loops at centromere

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FYPO:0003152 - increased protein level during cellular response to heat

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FYPO:0001327 - increased protein level during vegetative growth

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FYPO:0005893 - increased protein level in chromatin

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FYPO:0004237 - increased protein localization to heterochromatin at centromere outer repeat region

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FYPO:0004377 - increased protein localization to heterochromatin at silent mating-type cassette

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FYPO:0002541 - increased protein localization to nucleoplasm

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FYPO:0001130 - increased protein localization to nucleus during vegetative growth

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FYPO:0004380 - increased protein localization to pericentric heterochromatin during vegetative growth

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FYPO:0002082 - increased protein ubiquitination during vegetative growth

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FYPO:0005523 - increased reverse centromeric outer repeat transcript level

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FYPO:0001890 - increased RNA level

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FYPO:0006270 - increased RNA level during cellular response to phosphate starvation

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FYPO:0003033 - increased RNA level during glucose starvation

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FYPO:0000825 - increased RNA level during vegetative growth

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FYPO:0008423 - increased spatial extent of protein localization to heterochromatin

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FYPO:0005978 - increased spliced cen-dg RNA level

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FYPO:0007320 - increased stress granule assembly during vegetative growth

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FYPO:0005917 - increased subtelomeric heterochromatin RNA level

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FYPO:0004573 - increased telomeric transcript level

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FYPO:0004557 - increased vegetative cell population growth

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FYPO:0004344 - increased viability upon nitrogen starvation

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FYPO:0001489 - inviable vegetative cell

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FYPO:0000228 - lagging mitotic chromosomes

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FYPO:0006518 - loss of viability in G0

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FYPO:0006660 - loss of viability upon G0 to G1 transition

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FYPO:0006670 - meiotic cell cycle entry in haploid cell

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FYPO:0004382 - meroterically attached lagging mitotic chromosomes

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FYPO:0002837 - normal centromeric outer repeat transcript-derived siRNA level

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FYPO:0003800 - normal chromatin binding at replication origin

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FYPO:0006992 - normal chromatin silencing at centromere otr1R

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FYPO:0002336 - normal chromatin silencing at silent mating-type cassette

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FYPO:0003082 - normal genetic imprinting at mating-type locus

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FYPO:0001164 - normal growth on glucose carbon source

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FYPO:0000963 - normal growth on hydroxyurea

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FYPO:0000957 - normal growth on methyl methanesulfonate

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FYPO:0002613 - normal histone H2A phosphorylation at mating type locus during vegetative growth

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FYPO:0007147 - normal Mei2 nuclear dot formation

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FYPO:0003153 - normal protein level during cellular response to heat

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FYPO:0002574 - normal protein localization to centromere during vegetative growth

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FYPO:0008154 - normal protein localization to centromeric heterochromatin

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FYPO:0006163 - normal protein localization to chromatin

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FYPO:0005079 - normal protein localization to chromatin at centromere central core

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FYPO:0005082 - normal protein localization to chromatin at long terminal repeat

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FYPO:0005083 - normal protein localization to chromatin at ncRNA gene

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FYPO:0005084 - normal protein localization to chromatin at rRNA gene

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FYPO:0005086 - normal protein localization to chromatin at snoRNA gene

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FYPO:0005085 - normal protein localization to chromatin at snRNA gene

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FYPO:0005087 - normal protein localization to chromatin at tRNA gene

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FYPO:0002625 - normal protein localization to chromatin rDNA

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FYPO:0007278 - normal protein localization to euchromatin

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FYPO:0005080 - normal protein localization to heterochromatin at centromere inner repeat

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FYPO:0002389 - normal protein localization to heterochromatin at centromere outer repeat

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FYPO:0004378 - normal protein localization to heterochromatin at silent mating-type cassette

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FYPO:0001317 - normal RNA level during vegetative growth

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FYPO:0003530 - normal S-phase DNA damage checkpoint

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FYPO:0006842 - normal spatial extent of CENP-A containing nucleosome assembly

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FYPO:0000943 - normal spore morphology

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FYPO:0008414 - normal stress granule assembly during glucose starvation

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FYPO:0005527 - normal subtelomeric chromatin knob formation

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FYPO:0004579 - normal transposable element-derived small RNA level

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FYPO:0001357 - normal vegetative cell population growth

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FYPO:0007629 - normal viability during G0

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FYPO:0001310 - normal viability in stationary phase

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FYPO:0009032 - resistance to bortezomib

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FYPO:0000763 - resistance to cadmium

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FYPO:0009068 - resistance to ciclopirox olamine

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FYPO:0000764 - resistance to cycloheximide

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FYPO:0002693 - resistance to diamide

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FYPO:0009034 - resistance to ethylenediaminetetraacetic acid

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FYPO:0009070 - resistance to itraconazole

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FYPO:0009085 - resistance to lithium chloride and sodium dodecyl sulfate

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FYPO:0000725 - resistance to methyl methanesulfonate

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FYPO:0003383 - resistance to tert-butyl hydroperoxide

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FYPO:0007808 - resistance to valproic acid

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FYPO:0004431 - sensitive to 2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone

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FYPO:0004434 - sensitive to 4-amino-1-methyl-1H-imidazole-5-carboselenoamide

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FYPO:0001098 - sensitive to 4-nitroquinoline N-oxide

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FYPO:0004325 - sensitive to 5-fluorouracil

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FYPO:0000084 - sensitive to 6-azauracil

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FYPO:0007921 - sensitive to benzamidine

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FYPO:0001701 - sensitive to bortezomib

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FYPO:0000097 - sensitive to caffeine during vegetative growth

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FYPO:0000104 - sensitive to cycloheximide

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FYPO:0007931 - sensitive to egtazic acid

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FYPO:0000785 - sensitive to formamide

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FYPO:0000087 - sensitive to hydrogen peroxide

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FYPO:0000088 - sensitive to hydroxyurea

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FYPO:0001719 - sensitive to lithium

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FYPO:0009086 - sensitive to lithium chloride and sodium dodecyl sulfate

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FYPO:0006836 - sensitive to magnesium chloride

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FYPO:0000089 - sensitive to methyl methanesulfonate

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FYPO:0001214 - sensitive to potassium chloride

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FYPO:0007924 - sensitive to potassium chloride and sodium dodecyl sulfate

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FYPO:0005889 - sensitive to sodium chloride

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FYPO:0000091 - sensitive to thiabendazole

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FYPO:0001457 - sensitive to tunicamycin

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FYPO:0003656 - sensitive to vanadate

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FYPO:0004433 - sensitive to viridicatumtoxin

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FYPO:0001234 - slow vegetative cell population growth

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FYPO:0002650 - split kinetochore during vegetative growth

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FYPO:0002060 - viable vegetative cell population

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FYPO:0002177 - viable vegetative cell with normal cell morphology

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