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Haploid genotype - rdp1delta

Genotype summary

Description
rdp1delta
Organism
Schizosaccharomyces pombe (fission yeast)

Allele summary

gene Product Allele name Description Type Expression
rdp1 (SPAC6F12.09)RNA-directed RNA polymerase (RDRC) Rdp1rdp1deltadeletiondeletionNull

Annotation

Single locus phenotype

FYPO:0007645 - abnormal chromosome segregation during G1 to G0 transition

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FYPO:0000427 - abnormal G1 to G0 transition

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FYPO:0000121 - abnormal sporulation

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FYPO:0008235 - abolished nuclear RNA-directed RNA polymerase complex assembly

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FYPO:0003744 - abolished protein localization to centromeric chromatin during vegetative growth

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FYPO:0003074 - abolished protein localization to pericentric heterochromatin during vegetative growth

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FYPO:0008011 - abolished siRNA loading onto RITS complex

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FYPO:0002835 - centromeric outer repeat transcript-derived siRNA absent

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FYPO:0004201 - decreased centromeric outer repeat transcript-derived siRNA level

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FYPO:0002834 - decreased chromatin silencing at centromere

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FYPO:0003411 - decreased chromatin silencing at centromere inner repeat

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FYPO:0003412 - decreased chromatin silencing at centromere outer repeat

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FYPO:0002827 - decreased chromatin silencing at silent mating-type cassette

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FYPO:0007009 - decreased heterochromatin assembly by small RNA

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FYPO:0000888 - decreased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

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FYPO:0006269 - decreased histone H3-K9 dimethylation at protein coding gene during vegetative growth

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FYPO:0003096 - decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth

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FYPO:0003571 - decreased histone H3-K9 methylation at silent mating-type cassette during vegetative growth

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FYPO:0006599 - decreased protein localization to centromeric chromatin during vegetative growth

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FYPO:0003573 - decreased protein localization to heterochromatin at silent mating-type cassette

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FYPO:0002386 - decreased protein localization to pericentric heterochromatin at centromere outer repeat region

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0004806 - incomplete cell wall disassembly at cell fusion site

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FYPO:0003938 - increased cell population growth during glucose starvation

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FYPO:0005261 - increased cell population growth on galactose carbon source

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FYPO:0009101 - increased cell population growth on glycerol and galactose carbon source

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FYPO:0004167 - increased cell population growth on glycerol carbon source

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FYPO:0009093 - increased cell population growth on lysine and serine nitrogen source

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FYPO:0009072 - increased cell population growth on lysine nitrogen source

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FYPO:0009028 - increased cell population growth on proline nitrogen source

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FYPO:0009074 - increased cell population growth on serine nitrogen source

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FYPO:0009096 - increased cell population growth on xylose carbon source

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FYPO:0000220 - increased centromeric outer repeat transcript level

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FYPO:0008148 - increased CUT RNA level

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FYPO:0003351 - increased duration of protein localization to kinetochore during vegetative growth

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FYPO:0001740 - increased gross chromosomal rearrangement

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FYPO:0007337 - increased histone H3-K4 methylation at centromere during vegetative growth

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FYPO:0007468 - increased histone H3-K9 dimethylation during G0

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FYPO:0002664 - increased level of stress responsive gene mRNA during vegetative growth

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FYPO:0005995 - increased lncRNA level

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FYPO:0000825 - increased RNA level during vegetative growth

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FYPO:0004557 - increased vegetative cell population growth

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FYPO:0006518 - loss of viability in G0

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FYPO:0000245 - loss of viability in stationary phase

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FYPO:0006660 - loss of viability upon G0 to G1 transition

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FYPO:0000674 - normal cell population growth at high temperature

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FYPO:0002141 - normal cell population growth at low temperature

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FYPO:0004331 - normal chromatin silencing at centromere central core

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FYPO:0002336 - normal chromatin silencing at silent mating-type cassette

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FYPO:0001164 - normal growth on glucose carbon source

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FYPO:0005866 - normal histone H3-K9 methylation at rDNA during vegetative growth

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FYPO:0005865 - normal histone H3-K9 methylation at silent mating-type cassette during vegetative growth

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FYPO:0009041 - resistance to 2,2′-dipyridyl

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FYPO:0009036 - resistance to benzamidine

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FYPO:0009068 - resistance to ciclopirox olamine

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FYPO:0009038 - resistance to egtazic acid

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FYPO:0009034 - resistance to ethylenediaminetetraacetic acid

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FYPO:0000725 - resistance to methyl methanesulfonate

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FYPO:0007010 - secondary siRNA absent from cell

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FYPO:0001098 - sensitive to 4-nitroquinoline N-oxide

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FYPO:0004325 - sensitive to 5-fluorouracil

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FYPO:0009067 - sensitive to amorolfine

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FYPO:0000096 - sensitive to cadmium

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FYPO:0000097 - sensitive to caffeine during vegetative growth

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FYPO:0000104 - sensitive to cycloheximide

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FYPO:0000799 - sensitive to diamide

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FYPO:0000842 - sensitive to ethanol during vegetative growth

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FYPO:0000785 - sensitive to formamide

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FYPO:0000087 - sensitive to hydrogen peroxide

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FYPO:0001719 - sensitive to lithium

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FYPO:0009086 - sensitive to lithium chloride and sodium dodecyl sulfate

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FYPO:0006836 - sensitive to magnesium chloride

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FYPO:0009088 - sensitive to magnesium chloride and sodium dodecyl sulfate

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FYPO:0001214 - sensitive to potassium chloride

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FYPO:0007924 - sensitive to potassium chloride and sodium dodecyl sulfate

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FYPO:0005889 - sensitive to sodium chloride

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FYPO:0000797 - sensitive to tert-butyl hydroperoxide

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FYPO:0000091 - sensitive to thiabendazole

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FYPO:0003656 - sensitive to vanadate

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FYPO:0009064 - sensitive to X-rays and rapamycin during vegetative growth.

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FYPO:0006076 - siRNA absent from cell

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FYPO:0002380 - viable spheroid vegetative cell

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FYPO:0002060 - viable vegetative cell population

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FYPO:0002177 - viable vegetative cell with normal cell morphology

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