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Haploid genotype - red1delta

Genotype summary

Description
red1delta
Organism
Schizosaccharomyces pombe (fission yeast)

Allele summary

gene Product Allele name Description Type Expression
red1 (SPAC1006.03c)MTREC (exosome adaptor) complex subunit Red1red1deltadeletiondeletionNull

Annotation

Single locus phenotype

FYPO:0003625 - abnormal microtubule cytoskeleton morphology during mitotic interphase

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FYPO:0003748 - abnormal protein localization to nuclear body

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FYPO:0008155 - abnormal regulatory lncRNA 3'-end processing

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FYPO:0003551 - abnormal RNA catabolic process

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FYPO:0007530 - abolished histone H3-K9 dimethylation at heterochromatin island at meiotic gene during vegetative growth

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FYPO:0003042 - abolished protein localization to nuclear exosome focus

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FYPO:0000705 - abolished protein-protein interaction

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FYPO:0000082 - decreased cell population growth at high temperature

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FYPO:0000080 - decreased cell population growth at low temperature

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FYPO:0000251 - decreased cell population growth on galactose carbon source

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FYPO:0001407 - decreased cell population growth on glucose carbon source

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FYPO:0009073 - decreased cell population growth on lysine nitrogen source

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FYPO:0009099 - decreased cell population growth on mannitol carbon source

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FYPO:0003094 - decreased centromeric outer repeat transcript level

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FYPO:0002174 - decreased degradation of DSR-containing RNA

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FYPO:0006269 - decreased histone H3-K9 dimethylation at protein coding gene during vegetative growth

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FYPO:0003230 - decreased histone H3-K9 methylation at heterochromatin island during vegetative growth

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FYPO:0000708 - decreased mating efficiency

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FYPO:0001324 - decreased protein level during vegetative growth

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FYPO:0007280 - decreased protein localization to nuclear exosome focus

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FYPO:0002137 - decreased RNA catabolic process during vegetative growth

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FYPO:0001117 - decreased RNA level during vegetative growth

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0000223 - elongated multiseptate vegetative cell

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FYPO:0003557 - increased antisense RNA level

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FYPO:0005258 - increased cell population growth at high temperature

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FYPO:0009077 - increased cell population growth on ethanol carbon source

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FYPO:0009052 - increased cell population growth on glutamate nitrogen source

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FYPO:0009094 - increased cell population growth on lysine and proline nitrogen source

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FYPO:0009093 - increased cell population growth on lysine and serine nitrogen source

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FYPO:0009028 - increased cell population growth on proline nitrogen source

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FYPO:0009074 - increased cell population growth on serine nitrogen source

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FYPO:0009096 - increased cell population growth on xylose carbon source

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FYPO:0008148 - increased CUT RNA level

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FYPO:0008113 - increased intron retention

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FYPO:0002960 - increased level of DSR-containing meiotic gene mRNA during vegetative growth

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FYPO:0002173 - increased level of meiotic gene mRNA during vegetative growth

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FYPO:0005995 - increased lncRNA level

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FYPO:0002931 - increased poly(A) tail length

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FYPO:0001908 - increased pre-mRNA level

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FYPO:0003558 - increased repeat element RNA level

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FYPO:0000825 - increased RNA level during vegetative growth

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FYPO:0003237 - increased RNA splicing at cryptic splice sites

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FYPO:0004557 - increased vegetative cell population growth

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FYPO:0000245 - loss of viability in stationary phase

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FYPO:0003056 - Mei2 nuclear dot absent from cell

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FYPO:0005860 - Mei2 nuclear dot present in cell during vegetative growth

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FYPO:0005859 - multiple Mei2 nuclear dots present in cell

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FYPO:0001164 - normal growth on glucose carbon source

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FYPO:0007225 - normal heterochromatin assembly by small RNA

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FYPO:0003235 - normal histone H3-K9 methylation at centromere outer repeat during vegetative growth

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FYPO:0005866 - normal histone H3-K9 methylation at rDNA during vegetative growth

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FYPO:0000833 - normal protein level during vegetative growth

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FYPO:0006080 - normal protein localization to nuclear exosome focus during vegetative growth

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FYPO:0004910 - normal punctate nuclear protein localization

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FYPO:0009041 - resistance to 2,2′-dipyridyl

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FYPO:0009030 - resistance to amitrole

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FYPO:0009036 - resistance to benzamidine

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FYPO:0001884 - resistance to Calcofluor White

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FYPO:0009068 - resistance to ciclopirox olamine

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FYPO:0002634 - resistance to cobalt

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FYPO:0000764 - resistance to cycloheximide

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FYPO:0009034 - resistance to ethylenediaminetetraacetic acid

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FYPO:0001103 - resistance to hydrogen peroxide

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FYPO:0001583 - resistance to lithium

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FYPO:0009081 - resistance to potassium chloride and methyl methanesulfonate

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FYPO:0005266 - resistance to sodium dodecyl sulfate

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FYPO:0001034 - resistance to tunicamycin

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FYPO:0000830 - resistance to vanadate

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FYPO:0004325 - sensitive to 5-fluorouracil

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FYPO:0009067 - sensitive to amorolfine

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FYPO:0000095 - sensitive to bleomycin

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FYPO:0001701 - sensitive to bortezomib

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FYPO:0001501 - sensitive to brefeldin A

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FYPO:0009080 - sensitive to calcofluor and sodium dodecyl sulfate

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FYPO:0000104 - sensitive to cycloheximide

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FYPO:0000842 - sensitive to ethanol during vegetative growth

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FYPO:0000785 - sensitive to formamide

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FYPO:0000088 - sensitive to hydroxyurea

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FYPO:0009084 - sensitive to lithium chloride and methyl methanesulfonate

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FYPO:0009086 - sensitive to lithium chloride and sodium dodecyl sulfate

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FYPO:0006836 - sensitive to magnesium chloride

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FYPO:0009088 - sensitive to magnesium chloride and sodium dodecyl sulfate

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FYPO:0000089 - sensitive to methyl methanesulfonate

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FYPO:0007924 - sensitive to potassium chloride and sodium dodecyl sulfate

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FYPO:0002617 - sensitive to sodium butyrate

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FYPO:0009090 - sensitive to sodium chloride and sodium dodecyl sulfate

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FYPO:0007938 - sensitive to tea tree oil

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FYPO:0000797 - sensitive to tert-butyl hydroperoxide

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FYPO:0000091 - sensitive to thiabendazole

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FYPO:0002701 - sensitive to torin1

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FYPO:0002546 - sensitive to trichostatin A

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FYPO:0000115 - sensitive to valproic acid

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FYPO:0003656 - sensitive to vanadate

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FYPO:0006821 - slow vegetative cell growth

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FYPO:0002060 - viable vegetative cell population

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FYPO:0001510 - viable vegetative cell, abnormal cell shape, normal cell size

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