DNA-directed RNA polymerase II complex TFIIS subunit Rpb9
PF02150
PFAM
Zn_ribbon_RPB9
RNA polymerases M/15 Kd subunit
IPR001529
Zn_ribbon_RPB9
DNA-directed RNA polymerase II subunit RPB9-like, zinc ribbon
PF01096
PFAM
Zn_ribbon_TFIIS
Transcription factor S-II (TFIIS)
IPR001222
Znf_TFIIS
Zinc finger, TFIIS-type
cd10508
CDD
Zn-ribbon_RPB9
Zn-ribbon_RPB9
IPR034012
Zn_ribbon_RPB9_C
Pol II subunit B9, C-terminal zinc ribbon
PS01030
PROSITE_PATTERNS
RNA_POL_M_15KD
RNA polymerases M / 15 Kd subunits signature.
IPR019761
DNA-dir_RNA_pol-M_15_CS
DNA-directed RNA polymerase M, 15kDa subunit, conserved site
PS00466
PROSITE_PATTERNS
ZF_TFIIS_1
Zinc finger TFIIS-type signature.
IPR001222
Znf_TFIIS
Zinc finger, TFIIS-type
PS51133
PROSITE_PROFILES
ZF_TFIIS_2
Zinc finger TFIIS-type profile.
IPR001222
Znf_TFIIS
Zinc finger, TFIIS-type
SM00661
SMART
rpol9cneu
IPR001529
Zn_ribbon_RPB9
DNA-directed RNA polymerase II subunit RPB9-like, zinc ribbon
SM00440
SMART
Cys4_2
IPR001222
Znf_TFIIS
Zinc finger, TFIIS-type
G3DSA:2.20.25.10:FF:000016
FUNFAM
DNA-directed RNA polymerase II subunit RPB9
G3DSA:2.20.25.10:FF:000008
FUNFAM
DNA-directed RNA polymerase II subunit RPB9
SSF57783
SUPERFAMILY
Zinc beta-ribbon
G3DSA:2.20.25.10
GENE3D
PTHR11239
PANTHER
DNA-DIRECTED RNA POLYMERASE
IPR012164
Rpa12/Rpb9/Rpc10/TFS
DNA-directed RNA polymerase subunit/transcription factor S
PIRSF005586
PIRSF
RNApol_RpoM
IPR012164
Rpa12/Rpb9/Rpc10/TFS
DNA-directed RNA polymerase subunit/transcription factor S
mobidb-lite-Disorder
MOBIDB-Disorder
disorder_prediction
consensus disorder prediction
mobidb-lite-Polar
MOBIDB-Polar
disorder_prediction
consensus disorder prediction
SPAPYUG7.04c.1
rpb9.1
chromosome_1
reverse
five_prime_utr
SPAPYUG7.04c.1:five_prime_UTR:1
chromosome_1
reverse
ATATCCACTAACCACCACGTTCTTTTGAAAGTTTATTGCGTTGAAGTAAAATACTTTTGTTTGCTTTTTTAAA
exon
SPAPYUG7.04c.1:exon:1
chromosome_1
reverse
0
ATGTCAAATTTTCAATATTGTATAGAATGCAATAATATGCT
cds_intron
SPAPYUG7.04c.1:intron:1
chromosome_1
reverse
GTACGGATTAGTTTCTCAAAAAGATGACACTGAAAATTGTTTGAAAACACTAACATGAAATAAATAG
exon
SPAPYUG7.04c.1:exon:2
chromosome_1
reverse
0
GTACCCTAGAGAGGATAAAGTGGATCGTGTTCTGAGGCTAGCTTGTCGTAATTGTGATTACTCAGAG
cds_intron
SPAPYUG7.04c.1:intron:2
chromosome_1
reverse
GTAAGCTTGTTTTTTTCTCCTACTGGGTTTATTCACTTCAAGAAAAAAATTCGAAGTTCTTTTCGATTACTTTTTTCCTCATCATTTGGAAGTTTTAAATATCTCATCAGCTAATTTGTATAG
exon
SPAPYUG7.04c.1:exon:3
chromosome_1
reverse
0
ATCGCTGCTACTAGTAAAGTTTATCGCCATGAGTTACAAAGCTCCAATGT
cds_intron
SPAPYUG7.04c.1:intron:3
chromosome_1
reverse
GTAAGTTAGATTTCATCCTTCGAATAATCACTAAATTTGTAG
exon
SPAPYUG7.04c.1:exon:4
chromosome_1
reverse
0
AGAAAACACGACGGTCAGTCACGACGCTTCAACGGACCCTACTTTACCTAGATCAGACAAAGAATGCCCGCGTTGTCATCAACATGAAGCAGTTTTTTATCAGACTCATTCTCGTCGGGGTGATACTATGATG
cds_intron
SPAPYUG7.04c.1:intron:4
chromosome_1
reverse
GTGTGTTTCGCATTGTTTCATTGAGAAAACAATTTTAATATTTAGGTTTAAAAACAATTTTACTGACTTAATTAG
exon
SPAPYUG7.04c.1:exon:5
chromosome_1
reverse
0
ACTCTGATTTATGTTTGCGTACATTGTGGATTTGCTTTTGAAGAACAGTAA
three_prime_utr
SPAPYUG7.04c.1:three_prime_UTR:1
chromosome_1
reverse
TATGCGACAATTCGGTCTAACAAGGGATTGTAAAACTAGCTGCGTCCACCAATGGCTCTTAGACTTCGGTTTAAATGATCCGCTTGATGTAACCACTCTCTCGCTTCTGTGCTGGAAAACTGGATTTTCGAGTGATACCAGCCACCTTTGCCGAAAATGGATTTACCAGCCTCTCAATCATATGCTCGCCTCCTTCCTTTATATTAAGCAACGCGCCTACCAAAACACTTGAATTTCTTTATTTCACATTCGGTGTACCTTCTGGAATATACTGAAACTGTTTCAGTTATTTGT
mRNA
SPAPYUG7.04c.1:pep
MSNFQYCIECNNMLYPREDKVDRVLRLACRNCDYSEIAATSKVYRHELQSSNVENTTVSHDASTDPTLPRSDKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFEEQ*
DNA-directed RNA polymerase II complex TFIIS subunit Rpb9
chromosome_1
reverse
0