DNA-directed RNA polymerase II complex TFIIS subunit Rpb9
PF01096
Pfam
Zn_ribbon_TFIIS
Transcription factor S-II (TFIIS)
IPR001222
Znf_TFIIS
Zinc finger, TFIIS-type
PF02150
Pfam
Zn_ribbon_RPB9
RNA polymerases M/15 Kd subunit
IPR001529
Zn_ribbon_RPB9
DNA-directed RNA polymerase II subunit RPB9-like, zinc ribbon
cd10508
CDD
Zn-ribbon_RPB9
C-terminal zinc ribbon domain of RPB9 subunit of RNA polymerase II
IPR034012
Zn_ribbon_RPB9_C
Pol II subunit B9, C-terminal zinc ribbon
PS00466
PROSITE patterns
ZF_TFIIS_1
Zinc finger TFIIS-type signature
IPR001222
Znf_TFIIS
Zinc finger, TFIIS-type
PS01030
PROSITE patterns
RNA_POL_M_15KD
RNA polymerases M / 15 Kd subunits signature
IPR019761
DNA-dir_RNA_pol-M_15_CS
DNA-directed RNA polymerase M, 15kDa subunit, conserved site
PS51133
PROSITE profiles
ZF_TFIIS_2
Zinc finger TFIIS-type profile
IPR001222
Znf_TFIIS
Zinc finger, TFIIS-type
SM00440
SMART
ZnF_C2C2
C2C2 Zinc finger
IPR001222
Znf_TFIIS
Zinc finger, TFIIS-type
SM00661
SMART
RPOL9
RNA polymerase subunit 9
IPR001529
Zn_ribbon_RPB9
DNA-directed RNA polymerase II subunit RPB9-like, zinc ribbon
G3DSA:2.20.25.10:FF:000008
CATH-FunFam
DNA-directed RNA polymerase II subunit RPB9
G3DSA:2.20.25.10:FF:000016
CATH-FunFam
DNA-directed RNA polymerase II subunit RPB9
G3DSA:2.20.25.10
CATH-Gene3D
SSF57783
SUPERFAMILY
Zinc beta-ribbon
PTHR11239
PANTHER
DNA-DIRECTED RNA POLYMERASE
IPR012164
Rpa12/Rpb9/Rpc10/TFS
DNA-directed RNA polymerase subunit/transcription factor S
PIRSF005586
PIRSF
RNApol_RpoM
DNA-directed RNA polymerase subunit, RpoM type
IPR012164
Rpa12/Rpb9/Rpc10/TFS
DNA-directed RNA polymerase subunit/transcription factor S
mobidb-lite-Disorder
MobiDB-Disorder
disorder_prediction
Consensus disorder prediction
mobidb-lite-Polar
MobiDB-Polar
disorder_prediction
Consensus disorder prediction
SPAPYUG7.04c.1
rpb9.1
chromosome_1
reverse
five_prime_utr
SPAPYUG7.04c.1:five_prime_UTR:1
chromosome_1
reverse
ATATCCACTAACCACCACGTTCTTTTGAAAGTTTATTGCGTTGAAGTAAAATACTTTTGTTTGCTTTTTTAAA
exon
SPAPYUG7.04c.1:exon:1
chromosome_1
reverse
0
ATGTCAAATTTTCAATATTGTATAGAATGCAATAATATGCT
cds_intron
SPAPYUG7.04c.1:intron:1
chromosome_1
reverse
GTACGGATTAGTTTCTCAAAAAGATGACACTGAAAATTGTTTGAAAACACTAACATGAAATAAATAG
exon
SPAPYUG7.04c.1:exon:2
chromosome_1
reverse
0
GTACCCTAGAGAGGATAAAGTGGATCGTGTTCTGAGGCTAGCTTGTCGTAATTGTGATTACTCAGAG
cds_intron
SPAPYUG7.04c.1:intron:2
chromosome_1
reverse
GTAAGCTTGTTTTTTTCTCCTACTGGGTTTATTCACTTCAAGAAAAAAATTCGAAGTTCTTTTCGATTACTTTTTTCCTCATCATTTGGAAGTTTTAAATATCTCATCAGCTAATTTGTATAG
exon
SPAPYUG7.04c.1:exon:3
chromosome_1
reverse
0
ATCGCTGCTACTAGTAAAGTTTATCGCCATGAGTTACAAAGCTCCAATGT
cds_intron
SPAPYUG7.04c.1:intron:3
chromosome_1
reverse
GTAAGTTAGATTTCATCCTTCGAATAATCACTAAATTTGTAG
exon
SPAPYUG7.04c.1:exon:4
chromosome_1
reverse
0
AGAAAACACGACGGTCAGTCACGACGCTTCAACGGACCCTACTTTACCTAGATCAGACAAAGAATGCCCGCGTTGTCATCAACATGAAGCAGTTTTTTATCAGACTCATTCTCGTCGGGGTGATACTATGATG
cds_intron
SPAPYUG7.04c.1:intron:4
chromosome_1
reverse
GTGTGTTTCGCATTGTTTCATTGAGAAAACAATTTTAATATTTAGGTTTAAAAACAATTTTACTGACTTAATTAG
exon
SPAPYUG7.04c.1:exon:5
chromosome_1
reverse
0
ACTCTGATTTATGTTTGCGTACATTGTGGATTTGCTTTTGAAGAACAGTAA
three_prime_utr
SPAPYUG7.04c.1:three_prime_UTR:1
chromosome_1
reverse
TATGCGACAATTCGGTCTAACAAGGGATTGTAAAACTAGCTGCGTCCACCAATGGCTCTTAGACTTCGGTTTAAATGATCCGCTTGATGTAACCACTCTCTCGCTTCTGTGCTGGAAAACTGGATTTTCGAGTGATACCAGCCACCTTTGCCGAAAATGGATTTACCAGCCTCTCAATCATATGCTCGCCTCCTTCCTTTATATTAAGCAACGCGCCTACCAAAACACTTGAATTTCTTTATTTCACATTCGGTGTACCTTCTGGAATATACTGAAACTGTTTCAGTTATTTGT
mRNA
SPAPYUG7.04c.1:pep
MSNFQYCIECNNMLYPREDKVDRVLRLACRNCDYSEIAATSKVYRHELQSSNVENTTVSHDASTDPTLPRSDKECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFEEQ*
DNA-directed RNA polymerase II complex TFIIS subunit Rpb9
chromosome_1
reverse
0