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Reference - GO_REF:0000036 - Manual annotations that require more than one source of functional data to support the assignment of the associated GO term

Reference summary

PubMed ID
GO_REF:0000036
Title
Manual annotations that require more than one source of functional data to support the assignment of the associated GO term
Authors
GO Annotation working group
Abstract
The Gene Ontology Consortium uses the IC (Inferred by Curator) evidence code when an annotation cannot be supported by any direct evidence, but can be inferred by GO annotations that have been annotated to the same gene/gene product identifier in conjunction with the curator's knowledge of biology (supporting GO annotations must not be IC-evidenced). In many cases an IC-evidenced annotation simply applies the same reference that was used in the supporting GO annotation. The use of IC evidence code in an annotation with reference GO_REF:0000036 signifies a curator inferred the GO term based on evidence from multiple sources of evidence/GO annotations. The 'with/from' field in these annotations will therefore supply more than one GO identifier, obtained from the set of supporting GO annotations assigned to the same gene/gene product identifier which cite publicly-available references.

Annotation

GO biological process

GO:0000147 - actin cortical patch assembly

Genes:

GO:0044347 - cell wall polysaccharide catabolic process

Genes:

GO:0009272 - fungal-type cell wall biogenesis

Genes:

GO:0043504 - mitochondrial DNA repair

Genes:

GO:0090615 - mitochondrial mRNA processing

Genes:

GO:0000963 - mitochondrial RNA processing

Genes:

GO:0070126 - mitochondrial translational termination

Genes:

GO:0007005 - mitochondrion organization

Genes:

GO:0005976 - polysaccharide metabolic process

Genes:

GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process

Genes:

GO:0034975 - protein folding in endoplasmic reticulum

Genes:

GO:0006357 - regulation of transcription by RNA polymerase II

Genes:

GO:1903469 - removal of RNA primer involved in mitotic DNA replication

Genes:

GO cellular component

GO:0000785 - chromatin

Genes:

GO:0098554 - cytoplasmic side of endoplasmic reticulum membrane

Genes:

GO:0005789 - endoplasmic reticulum membrane

Genes:

GO:0009897 - external side of plasma membrane

Genes:

GO:0000329 - fungal-type vacuole membrane

Genes:

GO:0099617 - matrix side of mitochondrial inner membrane

Genes:

GO:0005759 - mitochondrial matrix

Genes:

GO:0031966 - mitochondrial membrane

Genes:

GO:0000228 - nuclear chromosome

Genes:

GO:0043596 - nuclear replication fork

Genes:

GO:0005634 - nucleus

Genes:

GO:0005886 - plasma membrane

Genes:

GO:0031520 - plasma membrane of cell tip

Genes: