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Reference - PMID:11073995 - Rdp1, a novel zinc finger protein, regulates the DNA damage response of rhp51(+) from Schizosaccharomyces pombe.

Reference summary

PubMed ID
PMID:11073995
Title
Rdp1, a novel zinc finger protein, regulates the DNA damage response of rhp51(+) from Schizosaccharomyces pombe.
Authors
Shim YS, Jang YK, Lim MS, Lee JS, Seong RH, Hong SH, Park SD
Citation
Mol Cell Biol 2000 Dec;20(23):8958-68
Publication year
2000
Abstract
The Schizosaccharomyces pombe DNA repair gene rhp51(+) encodes a RecA-like protein with the DNA-dependent ATPase activity required for homologous recombination. The level of the rhp51(+) transcript is increased by a variety of DNA-damaging agents. Its promoter has two cis-acting DNA damage-responsive elements (DREs) responsible for DNA damage inducibility. Here we report identification of Rdp1, which regulates rhp51(+) expression through the DRE of rhp51(+). The protein contains a zinc finger and a polyalanine tract similar to ones previously implicated in DNA binding and transactivation or repression, respectively. In vitro footprinting and competitive binding assays indicate that the core consensus sequences (NGG/TTG/A) of DRE are crucial for the binding of Rdp1. Mutations of both DRE1 and DRE2 affected the damage-induced expression of rhp51(+), indicating that both DREs are required for transcriptional activation. In addition, mutations in the DREs significantly reduced survival rates after exposure to DNA-damaging agents, demonstrating that the damage response of rhp51(+) enhances the cellular repair capacity. Surprisingly, haploid cells containing a complete rdp1 deletion could not be recovered, indicating that rdp1(+) is essential for cell viability and implying the existence of other target genes. Furthermore, the DNA damage-dependent expression of rhp51(+) was significantly reduced in checkpoint mutants, raising the possibility that Rdp1 may mediate damage checkpoint-dependent transcription of rhp51(+).

Annotation

Comment

PBO:0001685 - promoter contains DRE element

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GO biological process

GO:0006357 - regulation of transcription by RNA polymerase II

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GO molecular function

GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific

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GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding

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Multi-locus phenotype

FYPO:0003142 - decreased RNA level during cellular response to methyl methanesulfonate

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FYPO:0003034 - decreased RNA level during cellular response to UV

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Single locus phenotype

FYPO:0002003 - abolished RNA polymerase II proximal promoter sequence-specific DNA binding

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FYPO:0003142 - decreased RNA level during cellular response to methyl methanesulfonate

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FYPO:0003034 - decreased RNA level during cellular response to UV

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FYPO:0004142 - decreased RNA polymerase II proximal promoter sequence-specific DNA binding

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FYPO:0000316 - inviable after spore germination

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FYPO:0001490 - inviable elongated vegetative cell

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FYPO:0002061 - inviable vegetative cell population

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FYPO:0001317 - normal RNA level during vegetative growth

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FYPO:0000089 - sensitive to methyl methanesulfonate

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FYPO:0000268 - sensitive to UV during vegetative growth

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FYPO:0003612 - viable spore population

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