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Reference - PMID:12376568 - An evolutionarily conserved fission yeast protein, Ned1, implicated in normal nuclear morphology and chromosome stability, interacts with Dis3, Pim1/RCC1 and an essential nucleoporin.

Reference summary

PubMed ID
PMID:12376568
Title
An evolutionarily conserved fission yeast protein, Ned1, implicated in normal nuclear morphology and chromosome stability, interacts with Dis3, Pim1/RCC1 and an essential nucleoporin.
Authors
Tange Y, Hirata A, Niwa O
Citation
J Cell Sci 2002 Nov 15;115(Pt 22):4375-85
Publication year
2002
Abstract
We identified a novel fission yeast gene, ned1(+), with pleiotropic mutations that have a high incidence of chromosome missegregation, aberrantly shaped nuclei, overdeveloped endoplasmic reticulum-like membranes, and increased sensitivity to a microtubule destabilizing agent. Ned1 protein, which was phosphorylated in a growth-related manner, interacted in a yeast two-hybrid system with Dis3 as well as with Pim1/RCC1 (nucleotide exchange factor for Ran). Ned1 also interacted with an essential nucleoporin, a probable homologue of mammalian Nup98/96. The ned1 gene displayed a variety of genetic interactions with factors involved in nuclear transport and chromosome segregation, including the crm1 (exportin), spi1 (small GTPase Ran), pim1, and dis genes. A substitution mutation that affected the two-hybrid interaction with Dis3 increased chromosome instability, suggesting the functional importance of the interaction. Overproduction of Ned1 protein induced formation of an abnormal microtubule bundle within the nucleus, apparently independently of the spindle pole body, but dependent on pim1(+) activity. The ned1(+) gene belongs to an evolutionarily conserved gene family, which includes the mouse Lpin genes, one of whose mutations is responsible for lipodystrophy.

Annotation

GO biological process

GO:0007029 - endoplasmic reticulum organization

Genes:

GO:0071763 - nuclear membrane organization

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GO:0006913 - nucleocytoplasmic transport

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GO cellular component

GO:0005783 - endoplasmic reticulum

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GO:0031965 - nuclear membrane

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GO:0005643 - nuclear pore

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GO molecular function

GO:0005515 - protein binding

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Modification

MOD:00696 - phosphorylated residue

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Single locus phenotype

FYPO:0001778 - abnormal centromere localization

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FYPO:0001418 - abnormal microtubule cytoskeleton morphology during vegetative growth

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FYPO:0000534 - abnormal mitotic spindle pole body localization

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FYPO:0000062 - abnormal nuclear morphology during vegetative growth

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FYPO:0001338 - abnormal nucleus positioning during vegetative growth

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FYPO:0001370 - abnormal protein localization

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FYPO:0000502 - abnormally arrested mitotic cell cycle progression

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FYPO:0001792 - abolished mitotic spindle pole body duplication

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FYPO:0000705 - abolished protein-protein interaction

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FYPO:0000080 - decreased cell population growth at low temperature

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FYPO:0000278 - decreased cell population growth following spore germination

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FYPO:0000415 - decreased mitotic sister chromatid segregation

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0000832 - elongated nucleus during vegetative growth

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FYPO:0001783 - elongated, constricted nucleus

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FYPO:0000344 - enlarged nucleus during vegetative growth

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FYPO:0001784 - excess endoplasmic reticulum membrane present

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FYPO:0001386 - increased haploidization

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FYPO:0001840 - increased minichromosome loss during vegetative growth

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FYPO:0001327 - increased protein level during vegetative growth

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FYPO:0000316 - inviable after spore germination

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FYPO:0000228 - lagging mitotic chromosomes

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FYPO:0001164 - normal growth on glucose carbon source

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FYPO:0000964 - normal growth on thiabendazole

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FYPO:0001839 - normal minichromosome loss

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FYPO:0001380 - normal nuclear morphology during vegetative growth

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FYPO:0000833 - normal protein level during vegetative growth

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FYPO:0001788 - normal protein localization to cytoplasm

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FYPO:0001789 - normal protein localization to nucleus during cellular response to oxidative stress

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FYPO:0000703 - normal protein-protein interaction

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FYPO:0001357 - normal vegetative cell population growth

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FYPO:0000073 - resistance to caffeine

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FYPO:0000767 - resistance to staurosporine

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FYPO:0001793 - resistant to cell wall digestion

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FYPO:0000091 - sensitive to thiabendazole

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FYPO:0001491 - viable vegetative cell

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Orthologs