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Reference - PMID:12417737 - Two ubiquitin-conjugating enzymes, Rhp6 and UbcX, regulate heterochromatin silencing in Schizosaccharomyces pombe.

Reference summary

PubMed ID
PMID:12417737
Title
Two ubiquitin-conjugating enzymes, Rhp6 and UbcX, regulate heterochromatin silencing in Schizosaccharomyces pombe.
Authors
Choi ES, Kim HS, Jang YK, Hong SH, Park SD
Citation
Mol Cell Biol 2002 Dec;22(23):8366-74
Publication year
2002
Abstract
Methylation of histone H3 has been linked to the assembly of higher-order chromatin structures. Very recently, several examples, including the Schizosaccharomyces pombe mating-type region, chicken beta-globin locus, and inactive X-chromosome, revealed that H3-Lys9-methyl (Me) is associated with silent chromatin while H3-Lys4-Me is prominent in active chromatin. Surprisingly, it was shown that homologs of Drosophila Su(var)3-9 specifically methylate the Lys9 residue of histone H3. Here, to identify putative enzymes responsible for destabilization of heterochromatin, we screened genes whose overexpressions disrupt silencing at the silent mat3 locus in fission yeast. Interestingly, we identified two genes, rhp6(+) and ubcX(+) (ubiquitin-conjugating enzyme participating in silencing), both of which encode ubiquitin-conjugating enzymes. Their overexpression disrupted silencing at centromeres and telomeres as well as at mat3. Additionally, the overexpression interfered with centromeric function, as confirmed by elevated minichromosome loss and antimicrotubule drug sensitivity. On the contrary, deletion of rhp6(+) or ubcX(+) enhanced silencing at all heterochromatic regions tested, indicating that they are negative regulators of silencing. More importantly, chromatin immunoprecipitation showed that their overexpression alleviated the level of H3-Lys9-Me while enhancing the level of H3-Lys4-Me at the silent regions. On the contrary, their deletions enhanced the level of H3-Lys9-Me while alleviating that of H3-Lys4-Me. Taken together, the data suggest that two ubiquitin-conjugating enzymes, Rhp6 and UbcX, affect methylation of histone H3 at silent chromatin, which then reconfigures silencing.

Annotation

Single locus phenotype

FYPO:0000146 - abnormal chromatin silencing at centromere

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FYPO:0000156 - abnormal chromatin silencing at silent mating-type cassette

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FYPO:0000169 - abnormal chromatin silencing at subtelomere

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FYPO:0003096 - decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth

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FYPO:0003571 - decreased histone H3-K9 methylation at silent mating-type cassette during vegetative growth

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FYPO:0003572 - decreased histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth

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FYPO:0004540 - increased chromatin silencing

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FYPO:0005063 - increased histone H3-K4 methylation at mating type locus during vegetative growth

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FYPO:0005062 - increased histone H3-K4 methylation at telomere during vegetative growth

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FYPO:0005066 - increased histone H3-K9 methylation at centromere during vegetative growth

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FYPO:0005065 - increased histone H3-K9 methylation at mating type locus during vegetative growth

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FYPO:0005064 - increased histone H3-K9 methylation at telomere during vegetative growth

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FYPO:0001840 - increased minichromosome loss during vegetative growth

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FYPO:0000091 - sensitive to thiabendazole

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