PomBase home

Reference - PMID:12628934 - Pathway utilization in response to a site-specific DNA double-strand break in fission yeast.

Reference summary

PubMed ID
PMID:12628934
Title
Pathway utilization in response to a site-specific DNA double-strand break in fission yeast.
Authors
Prudden J, Evans JS, Hussey SP, Deans B, O'Neill P, Thacker J, Humphrey T
Citation
EMBO J 2003 Mar 17;22(6):1419-30
Publication year
2003
Abstract
We have examined the genetic requirements for efficient repair of a site-specific DNA double-strand break (DSB) in Schizosaccharomyces pombe. Tech nology was developed in which a unique DSB could be generated in a non-essential minichromosome, Ch(16), using the Saccharomyces cerevisiae HO-endonuclease and its target site, MATa. DSB repair in this context was predominantly through interchromosomal gene conversion. We found that the homologous recombination (HR) genes rhp51(+), rad22A(+), rad32(+) and the nucleotide excision repair gene rad16(+) were required for efficient interchromosomal gene conversion. Further, DSB-induced cell cycle delay and efficient HR required the DNA integrity checkpoint gene rad3(+). Rhp55 was required for interchromosomal gene conversion; however, an alternative DSB repair mechanism was used in an rhp55Delta background involving ku70(+) and rhp51(+). Surprisingly, DSB-induced minichromosome loss was significantly reduced in ku70Delta and lig4Delta non-homologous end joining (NHEJ) mutant backgrounds compared with wild type. Furthermore, roles for Ku70 and Lig4 were identified in suppressing DSB-induced chromosomal rearrangements associated with gene conversion. These findings are consistent with both competitive and cooperative interactions between components of the HR and NHEJ pathways.

Annotation

GO biological process

GO:0000724 - double-strand break repair via homologous recombination

Genes:

Multi-locus phenotype

FYPO:0005399 - abolished double-strand break repair via homologous recombination

Genes:

Genotypes:

FYPO:0003912 - decreased double-strand break repair via homologous recombination

Genes:

Genotypes:

Single locus phenotype

FYPO:0005400 - abnormal mitotic cell cycle regulation during cellular response to DNA double-strand break

Genes:

Genotypes:

FYPO:0003912 - decreased double-strand break repair via homologous recombination

Genes:

Genotypes:

FYPO:0003584 - increased double-strand break repair via nonhomologous end joining

Genes:

Genotypes:

FYPO:0001740 - increased gross chromosomal rearrangement

Genes:

Genotypes:

FYPO:0005398 - normal frequency of double-strand break repair via homologous recombination

Genes:

Genotypes: