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Reference - PMID:12867036 - Sir2 regulates histone H3 lysine 9 methylation and heterochromatin assembly in fission yeast.

Reference summary

PubMed ID
PMID:12867036
Title
Sir2 regulates histone H3 lysine 9 methylation and heterochromatin assembly in fission yeast.
Authors
Shankaranarayana GD, Motamedi MR, Moazed D, Grewal SI
Citation
Curr Biol 2003 Jul 15;13(14):1240-6
Publication year
2003
Abstract
Hypoacetylated histones are a hallmark of heterochromatin in organisms ranging from yeast to humans. Histone deacetylation is carried out by both NAD(+)-dependent and NAD(+)-independent enzymes. In the budding yeast Saccharomyces cerevisiae, deacetylation of histones in heterochromatic chromosomal domains requires Sir2, a phylogenetically conserved NAD(+)-dependent deacetylase. In the fission yeast Schizosaccharomyces pombe, NAD(+)-independent histone deacetylases are required for the formation of heterochromatin, but the role of Sir2-like deacetylases in this process has not been evaluated. Here, we show that spSir2, the S. pombe Sir2-like protein that is the most closely related to the S. cerevisiae Sir2, is an NAD(+)-dependent deacetylase that efficiently deacetylates histone H3 lysine 9 (K9) and histone H4 lysine 16 (K16) in vitro. In sir2 Delta cells, silencing at the donor mating-type loci, telomeres, and the inner centromeric repeats (imr) is abolished, while silencing at the outer centromeric repeats (otr) and rDNA is weakly reduced. Furthermore, Sir2 is required for hypoacetylation and methylation of H3-K9 and for the association of Swi6 with the above loci in vivo. Our findings suggest that the NAD(+)-dependent deacetylase Sir2 plays an important and conserved role in heterochromatin assembly in eukaryotes.

Annotation

GO molecular function

GO:0046969 - histone H3K9 deacetylase activity, NAD-dependent

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GO:0046970 - histone H4K16 deacetylase activity, NAD-dependent

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Single locus phenotype

FYPO:0007336 - abolished chromatin silencing at silent mating-type cassette

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FYPO:0003411 - decreased chromatin silencing at centromere inner repeat

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FYPO:0003412 - decreased chromatin silencing at centromere outer repeat

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FYPO:0004604 - decreased chromatin silencing at subtelomere

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FYPO:0008200 - decreased histone H3-K9 methylation at centromere inner repeat during vegetative growth

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FYPO:0003096 - decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth

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FYPO:0003571 - decreased histone H3-K9 methylation at silent mating-type cassette during vegetative growth

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FYPO:0000470 - decreased mating type switching

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FYPO:0005167 - decreased protein localization to chromatin at centromere inner repeat

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FYPO:0003573 - decreased protein localization to heterochromatin at silent mating-type cassette

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FYPO:0002386 - decreased protein localization to pericentric heterochromatin at centromere outer repeat region

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FYPO:0006815 - increased histone H3-K14 acetylation at centromere inner repeat during vegetative growth

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FYPO:0007633 - increased histone H3-K14 acetylation at silent mating-type cassette during vegetative growth

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FYPO:0006681 - increased histone H3-K9 acetylation at centromere inner repeat during vegetative growth

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FYPO:0006814 - increased histone H3-K9 acetylation at centromere outer repeat during vegetative growth

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FYPO:0004690 - increased histone H3-K9 acetylation at silent mating-type cassette during vegetative growth

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FYPO:0006670 - meiotic cell cycle entry in haploid cell

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