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Reference - PMID:15372076 - A chromodomain protein, Chp1, is required for the establishment of heterochromatin in fission yeast.

Reference summary

PubMed ID
PMID:15372076
Title
A chromodomain protein, Chp1, is required for the establishment of heterochromatin in fission yeast.
Authors
Sadaie M, Iida T, Urano T, Nakayama J
Citation
EMBO J 2004 Oct 01;23(19):3825-35
Publication year
2004
Abstract
The chromodomain is a conserved motif that functions in the epigenetic control of gene expression. Here, we report the functional characterization of a chromodomain protein, Chp1, in the heterochromatin assembly in fission yeast. We show that Chp1 is a structural component of three heterochromatic regions-centromeres, the mating-type region, and telomeres-and that its localization in these regions is dependent on the histone methyltransferase Clr4. Although deletion of the chp1(+) gene causes centromere-specific decreases in Swi6 localization and histone H3-K9 methylation, we show that the role of Chp1 is not exclusive to the centromeres. We found that some methylation persists in native centromeric regions in the absence of Chp1, which is also true for the mating-type region and telomeres, and determined that Swi6 and Chp2 are critical to maintaining this residual methylation. We also show that Chp1 participates in the establishment of repressive chromatin in all three chromosomal regions. These results suggest that different heterochromatic regions share common structural properties, and that centromeric heterochromatin requires Chp1-mediated establishment steps differently than do other heterochromatic regions.

Annotation

GO biological process

GO:0031508 - pericentric heterochromatin formation

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GO:0030466 - silent mating-type cassette heterochromatin formation

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GO:0031509 - subtelomeric heterochromatin formation

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GO cellular component

GO:0031934 - mating-type region heterochromatin

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GO:0005721 - pericentric heterochromatin

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GO:0140720 - subtelomeric heterochromatin

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Multi-locus phenotype

FYPO:0003097 - abolished histone H3-K9 methylation at centromere outer repeat during vegetative growth

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FYPO:0003096 - decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth

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Single locus phenotype

FYPO:0008153 - abolished protein localization to heterochromatin at silent mating-type cassette during vegetative growth

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FYPO:0005396 - abolished protein localization to subtelomeric heterochromatin

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Genotypes:

FYPO:0003096 - decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth

Genes:

Genotypes:

FYPO:0003571 - decreased histone H3-K9 methylation at silent mating-type cassette during vegetative growth

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Genotypes:

FYPO:0003572 - decreased histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth

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FYPO:0006599 - decreased protein localization to centromeric chromatin during vegetative growth

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Genotypes:

FYPO:0003573 - decreased protein localization to heterochromatin at silent mating-type cassette

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FYPO:0005918 - decreased protein localization to subtelomeric heterochromatin

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FYPO:0003235 - normal histone H3-K9 methylation at centromere outer repeat during vegetative growth

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FYPO:0005072 - normal protein localization to centromeric chromatin

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FYPO:0004378 - normal protein localization to heterochromatin at silent mating-type cassette

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Genotypes:

FYPO:0003576 - normal protein localization to subtelomeric heterochromatin

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Genotypes: