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Reference - PMID:15475954 - RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing.

Reference summary

PubMed ID
PMID:15475954
Title
RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing.
Authors
Noma K, Sugiyama T, Cam H, Verdel A, Zofall M, Jia S, Moazed D, Grewal SI
Citation
Nat Genet 2004 Nov;36(11):1174-80
Publication year
2004
Abstract
RNA interference is a conserved mechanism by which double-stranded RNA is processed into short interfering RNAs (siRNAs) that can trigger both post-transcriptional and transcriptional gene silencing. In fission yeast, the RNA-induced initiation of transcriptional gene silencing (RITS) complex contains Dicer-generated siRNAs and is required for heterochromatic silencing. Here we show that RITS components, including Argonaute protein, bind to all known heterochromatic loci. At the mating-type region, RITS is recruited to the centromere-homologous repeat cenH in a Dicer-dependent manner, whereas the spreading of RITS across the entire 20-kb silenced domain, as well as its subsequent maintenance, requires heterochromatin machinery including Swi6 and occurs even in the absence of Dicer. Furthermore, our analyses suggest that RNA interference machinery operates in cis as a stable component of heterochromatic domains with RITS tethered to silenced loci by methylation of histone H3 at Lys9. This tethering promotes the processing of transcripts and generation of additional siRNAs for heterochromatin maintenance.

Annotation

GO biological process

GO:0030466 - silent mating-type cassette heterochromatin formation

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GO cellular component

GO:0031934 - mating-type region heterochromatin

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GO:0005721 - pericentric heterochromatin

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GO:0140720 - subtelomeric heterochromatin

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Multi-locus phenotype

FYPO:0007336 - abolished chromatin silencing at silent mating-type cassette

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FYPO:0008153 - abolished protein localization to heterochromatin at silent mating-type cassette during vegetative growth

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FYPO:0002827 - decreased chromatin silencing at silent mating-type cassette

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Genotypes:

FYPO:0003571 - decreased histone H3-K9 methylation at silent mating-type cassette during vegetative growth

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Genotypes:

FYPO:0003573 - decreased protein localization to heterochromatin at silent mating-type cassette

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Single locus phenotype

FYPO:0008212 - abolished histone H3-K9 methylation at silent mating-type cassette during vegetative growth

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Genotypes:

FYPO:0008153 - abolished protein localization to heterochromatin at silent mating-type cassette during vegetative growth

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Genotypes:

FYPO:0008011 - abolished siRNA loading onto RITS complex

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Genotypes:

FYPO:0002827 - decreased chromatin silencing at silent mating-type cassette

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Genotypes:

FYPO:0003096 - decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth

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Genotypes:

FYPO:0003571 - decreased histone H3-K9 methylation at silent mating-type cassette during vegetative growth

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Genotypes:

FYPO:0003573 - decreased protein localization to heterochromatin at silent mating-type cassette

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Genotypes:

FYPO:0002386 - decreased protein localization to pericentric heterochromatin at centromere outer repeat region

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Genotypes:

FYPO:0002336 - normal chromatin silencing at silent mating-type cassette

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Genotypes:

FYPO:0005865 - normal histone H3-K9 methylation at silent mating-type cassette during vegetative growth

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Genotypes:

FYPO:0004378 - normal protein localization to heterochromatin at silent mating-type cassette

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FYPO:0008236 - normal siRNA loading onto RITS complex

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Genotypes: