PomBase home

Reference - PMID:15537537 - Heterochromatin regulates cell type-specific long-range chromatin interactions essential for directed recombination.

Reference summary

PubMed ID
PMID:15537537
Title
Heterochromatin regulates cell type-specific long-range chromatin interactions essential for directed recombination.
Authors
Jia S, Yamada T, Grewal SI
Citation
Cell 2004 Nov 12;119(4):469-80
Publication year
2004
Abstract
Mating-type switching in Schizosaccharomyces pombe involves replacing genetic information at the expressed mat1 locus with sequences copied from one of two silent donor loci, mat2-P or mat3-M, located within a 20-kb heterochromatic domain. Donor selection is dictated by cell type: mat2 is the preferred donor in M cells, and mat3 is the preferred donor in P cells. Here we show that a recombination-promoting complex (RPC) containing Swi2 and Swi5 proteins exhibits cell type-specific localization pattern at the silent mating-type region and this differential localization modulates donor preference during mating-type switching. In P cells, RPC localization is restricted to a recombination enhancer located adjacent to mat3, but in M cells, RPC spreads in cis across the entire silent mating-type interval in a heterochromatin-dependent manner. Our analyses implicate heterochromatin in long-range regulatory interactions and suggest that heterochromatin imposes at the mating-type region structural organization that is important for the donor-choice mechanism.

Annotation

GO cellular component

GO:0031934 - mating-type region heterochromatin

Genes:

GO:0005634 - nucleus

Genes:

Multi-locus phenotype

FYPO:0000470 - decreased mating type switching

Genes:

Genotypes:

Single locus phenotype

FYPO:0008153 - abolished protein localization to heterochromatin at silent mating-type cassette during vegetative growth

Genes:

Genotypes:

FYPO:0000470 - decreased mating type switching

Genes:

Genotypes:

FYPO:0003573 - decreased protein localization to heterochromatin at silent mating-type cassette

Genes:

Genotypes:

FYPO:0004377 - increased protein localization to heterochromatin at silent mating-type cassette

Genes:

Genotypes:

FYPO:0002360 - normal chromatin silencing at centromere

Genes:

Genotypes:

FYPO:0002336 - normal chromatin silencing at silent mating-type cassette

Genes:

Genotypes:

FYPO:0008070 - normal histone H3-K9 methylation at centromere during vegetative growth

Genes:

Genotypes:

FYPO:0005865 - normal histone H3-K9 methylation at silent mating-type cassette during vegetative growth

Genes:

Genotypes:

FYPO:0004378 - normal protein localization to heterochromatin at silent mating-type cassette

Genes:

Genotypes: