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Reference - PMID:16478992 - Requirement of fission yeast Cid14 in polyadenylation of rRNAs.

Reference summary

PubMed ID
PMID:16478992
Title
Requirement of fission yeast Cid14 in polyadenylation of rRNAs.
Authors
Win TZ, Draper S, Read RL, Pearce J, Norbury CJ, Wang SW
Citation
Mol Cell Biol 2006 Mar;26(5):1710-21
Publication year
2006
Abstract
Polyadenylation in eukaryotes is conventionally associated with increased nuclear export, translation, and stability of mRNAs. In contrast, recent studies suggest that the Trf4 and Trf5 proteins, members of a widespread family of noncanonical poly(A) polymerases, share an essential function in Saccharomyces cerevisiae that involves polyadenylation of nuclear RNAs as part of a pathway of exosome-mediated RNA turnover. Substrates for this pathway include aberrantly modified tRNAs and precursors of snoRNAs and rRNAs. Here we show that Cid14 is a Trf4/5 functional homolog in the distantly related fission yeast Schizosaccharomyces pombe. Unlike trf4 trf5 double mutants, cells lacking Cid14 are viable, though they suffer an increased frequency of chromosome missegregation. The Cid14 protein is constitutively nucleolar and is required for normal nucleolar structure. A minor population of polyadenylated rRNAs was identified. These RNAs accumulated in an exosome mutant, and their presence was largely dependent on Cid14, in line with a role for Cid14 in rRNA degradation. Surprisingly, both fully processed 25S rRNA and rRNA processing intermediates appear to be channeled into this pathway. Our data suggest that additional substrates may include the mRNAs of genes involved in meiotic regulation. Polyadenylation-assisted nuclear RNA turnover is therefore likely to be a common eukaryotic mechanism affecting diverse biological processes.

Annotation

Complementation

PBO:0018221 - functionally complements S. cerevisiae TRF4

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GO biological process

GO:0071035 - nuclear polyadenylation-dependent rRNA catabolic process

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GO:0043634 - polyadenylation-dependent ncRNA catabolic process

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GO cellular component

GO:0005730 - nucleolus

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GO:0005634 - nucleus

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GO molecular function

GO:1990817 - poly(A) RNA polymerase activity

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Multi-locus phenotype

FYPO:0002061 - inviable vegetative cell population

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FYPO:0002060 - viable vegetative cell population

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Qualitative gene expression

PomGeneEx:0000023 - protein level constant

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Single locus phenotype

FYPO:0000361 - abnormal nucleolar morphology

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Genotypes:

FYPO:0001270 - complete but unequal mitotic sister chromatid segregation

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Genotypes:

FYPO:0001407 - decreased cell population growth on glucose carbon source

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Genotypes:

FYPO:0000460 - decreased mitotic centromeric sister chromatid cohesion

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Genotypes:

FYPO:0004681 - decreased polyadenylated 5.8S rRNA level

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Genotypes:

FYPO:0001840 - increased minichromosome loss during vegetative growth

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FYPO:0004678 - increased polyadenylated 25S rRNA level

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FYPO:0000825 - increased RNA level during vegetative growth

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Genotypes:

FYPO:0001164 - normal growth on glucose carbon source

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Genotypes:

FYPO:0002390 - normal mitotic sister chromatid cohesion

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Genotypes:

FYPO:0004680 - normal polyadenylated 5.8S rRNA level

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Genotypes:

FYPO:0004682 - normal polyadenylated 5S rRNA level

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FYPO:0004679 - polyadenylated 25S rRNA absent from cell

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FYPO:0004325 - sensitive to 5-fluorouracil

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FYPO:0001234 - slow vegetative cell population growth

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FYPO:0004683 - unequal nucleolus inheritance

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Genotypes:

FYPO:0002177 - viable vegetative cell with normal cell morphology

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