PomBase home

Reference - PMID:17150956 - Identification and Characterization of a Schizosaccharomyces pombe RNA Polymerase II Elongation Factor with Similarity to the Metazoan Transcription Factor ELL.

Reference summary

PubMed ID
PMID:17150956
Title
Identification and Characterization of a Schizosaccharomyces pombe RNA Polymerase II Elongation Factor with Similarity to the Metazoan Transcription Factor ELL.
Authors
Banks CA, Kong SE, Spahr H, Florens L, Martin-Brown S, Washburn MP, Conaway JW, Mushegian A, Conaway RC
Citation
J Biol Chem 2007 Feb 23;282(8):5761-9
Publication year
2007
Abstract
ELL family transcription factors activate the rate of transcript elongation by suppressing transient pausing by RNA polymerase II at many sites along the DNA. ELL-associated factors 1 and 2 (EAF1 and EAF2) bind stably to ELL family members and act as strong positive regulators of their transcription activities. Orthologs of ELL and EAF have been identified in metazoa, but it has been unclear whether such RNA polymerase II elongation factors are utilized in lower eukaryotes. Using bioinformatic and biochemical approaches, we have identified a new Schizosaccharomyces pombe RNA polymerase II elongation factor that is composed of two subunits designated SpELL and SpEAF, which share weak sequence similarity with members of the metazoan ELL and EAF families. Like mammalian ELL-EAF, SpELL-SpEAF stimulates RNA polymerase II transcription elongation and pyrophosphorolysis. In addition, like many yeast RNA polymerase II elongation factors, deletion of the SpELL gene renders S. pombe sensitive to the drug 6-azauracil. Finally, phylogenetic analyses suggest that the SpELL and SpEAF proteins are evolutionarily conserved in many fungi but not in Saccharomyces cerevisiae.

Annotation

GO biological process

GO:0006368 - transcription elongation by RNA polymerase II

Genes:

GO cellular component

GO:0032783 - super elongation complex

Genes:

GO molecular function

GO:0005515 - protein binding

Genes:

Single locus phenotype

FYPO:0002876 - decreased transcription

Genes:

Genotypes:

FYPO:0005517 - normal growth on 6-azauracil

Genes:

Genotypes:

FYPO:0000084 - sensitive to 6-azauracil

Genes:

Genotypes:

FYPO:0002060 - viable vegetative cell population

Genes:

Genotypes:

Taxonomic conservation

PBO:0000055 - no apparent S. cerevisiae ortholog

Genes:

Warnings

PBO:0000070 - gene structure updated

Genes: