PomBase home

Reference - PMID:17304215 - Fission yeast Swi5/Sfr1 and Rhp55/Rhp57 differentially regulate Rhp51-dependent recombination outcomes.

Reference summary

PubMed ID
PMID:17304215
Title
Fission yeast Swi5/Sfr1 and Rhp55/Rhp57 differentially regulate Rhp51-dependent recombination outcomes.
Authors
Akamatsu Y, Tsutsui Y, Morishita T, Siddique MS, Kurokawa Y, Ikeguchi M, Yamao F, Arcangioli B, Iwasaki H
Citation
EMBO J 2007 Mar 07;26(5):1352-62
Publication year
2007
Abstract
Several accessory proteins referred to as mediators are required for the full activity of the Rad51 (Rhp51 in fission yeast) recombinase. In this study, we analyzed in vivo functions of the recently discovered Swi5/Sfr1 complex from fission yeast. In normally growing cells, the Swi5-GFP protein localizes to the nucleus, where it forms a diffuse nuclear staining pattern with a few distinct foci. These spontaneous foci do not form in swi2Delta mutants. Upon UV irradiation, Swi5 focus formation is induced in swi2Delta mutants, a response that depends on Sfr1 function, and Sfr1 also forms foci that colocalize with damage-induced Rhp51 foci. The number of UV-induced Rhp51 foci is partially reduced in swi5Delta and rhp57Delta mutants and completely abolished in an swi5Delta rhp57Delta double mutant. An assay for products generated by HO endonuclease-induced DNA double-strand breaks (DSBs) reveals that Rhp51 and Rhp57, but not Swi5/Sfr1, are essential for crossover production. These results suggest that Swi5/Sfr1 functions as an Rhp51 mediator but processes DSBs in a manner different from that of the Rhp55/57 mediator.

Annotation

Comment

PBO:0091489 - accumulation and persistence of Sfr1 foci in rad54delta cells

Genes:

PBO:0091490 - accumulation and persistence of Swi5 foci in rad54delta cells

Genes:

PBO:0091408 - assembly at damage sites is facilitated by Rad57 independently of Swi5

Genes:

PBO:0091407 - assembly at damage sites is facilitated by Swi5 independently of Rad57

Genes:

PBO:0091712 - facilitates Rad51 assembly at damage sites independently of Rad57

Genes:

PBO:0003696 - focus formation at DNA damage sites, Sfr1-dependent

Genes:

PBO:0003493 - focus formation at DNA damage sites, Swi5_dependent

Genes:

PBO:0003492 - focus formation at heterochromatic regions, Swi2_dependent

Genes:

PBO:0002148 - focus formation at heterochromatic regions, Swi5_dependent

Genes:

PBO:0002149 - focus formation at heterochromatic regions, Swi6_dependent

Genes:

PBO:0091368 - increased frequency of long tract gene conversion in the rad57delta single mutant was suppressed in the swi5delta rad57delta double mutant, to a level similar to that observed in the rad51 mutant

Genes:

PBO:0091366 - Rad57 facilitates Rad51 assembly at damage sites independently of Swi5

Genes:

PBO:0091728 - Sfr1 assembly at DNA damage sites is dependent on Rad51

Genes:

PBO:0091367 - swi5delta rad57delta double mutant produced each recombination class (gene conversion, crossover and long tract gene conversion) at frequencies similar to that of the rad51delta single mutant

Genes:

PBO:0091369 - swi5delta rad57delta double mutant showed a repair profile very similar to that of the rad51delta single mutant

Genes:

GO biological process

GO:0000730 - DNA recombinase assembly

Genes:

GO cellular component

GO:0031934 - mating-type region heterochromatin

Genes:

GO:0005634 - nucleus

Genes:

Multi-locus phenotype

FYPO:0003450 - abolished protein localization to nucleus

Genes:

Genotypes:

Single locus phenotype

FYPO:0000181 - abolished crossover

Genes:

Genotypes:

FYPO:0008168 - abolished nuclear foci

Genes:

Genotypes:

FYPO:0000185 - decreased gene conversion during vegetative growth

Genes:

Genotypes:

FYPO:0000199 - increased long tract gene conversion

Genes:

Genotypes:

FYPO:0004083 - normal protein level

Genes:

Genotypes: