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Reference - PMID:17310250 - Two different Argonaute complexes are required for siRNA generation and heterochromatin assembly in fission yeast.

Reference summary

PubMed ID
PMID:17310250
Title
Two different Argonaute complexes are required for siRNA generation and heterochromatin assembly in fission yeast.
Authors
Buker SM, Iida T, Bühler M, Villén J, Gygi SP, Nakayama J, Moazed D
Citation
Nat Struct Mol Biol 2007 Mar;14(3):200-7
Publication year
2007
Abstract
The RNA-induced transcriptional silencing (RITS) complex, containing Ago1, Chp1, Tas3 and centromeric small interfering RNAs (siRNAs), is required for heterochromatic gene silencing at centromeres. Here, we identify a second fission yeast Argonaute complex (Argonaute siRNA chaperone, ARC), which contains, in addition to Ago1, two previously uncharacterized proteins, Arb1 and Arb2, both of which are required for histone H3 Lys9 (H3-K9) methylation, heterochromatin assembly and siRNA generation. Furthermore, whereas siRNAs in the RITS complex are mostly single-stranded, siRNAs associated with ARC are mostly double-stranded, indicating that Arb1 and Arb2 inhibit the release of the siRNA passenger strand from Ago1. Consistent with this observation, purified Arb1 inhibits the slicer activity of Ago1 in vitro, and purified catalytically inactive Ago1 contains only double-stranded siRNA. Finally, we show that slicer activity is required for the siRNA-dependent association of Ago1 with chromatin and for the spreading of histone H3-K9 methylation.

Annotation

GO biological process

GO:0140727 - siRNA-mediated pericentric heterochromatin formation

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GO cellular component

GO:0033167 - ARC complex

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GO:0005737 - cytoplasm

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GO:0005634 - nucleus

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GO:0005721 - pericentric heterochromatin

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GO molecular function

GO:0070551 - endoribonuclease activity, cleaving siRNA-paired mRNA

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GO:0060698 - endoribonuclease inhibitor activity

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GO:0008428 - ribonuclease inhibitor activity

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GO:0035197 - siRNA binding

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Single locus phenotype

FYPO:0002835 - centromeric outer repeat transcript-derived siRNA absent

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Genotypes:

FYPO:0004201 - decreased centromeric outer repeat transcript-derived siRNA level

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FYPO:0006993 - decreased chromatin silencing at centromere otr1R

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Genotypes:

FYPO:0002827 - decreased chromatin silencing at silent mating-type cassette

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Genotypes:

FYPO:0000888 - decreased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

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Genotypes:

FYPO:0002386 - decreased protein localization to pericentric heterochromatin at centromere outer repeat region

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Genotypes:

FYPO:0006992 - normal chromatin silencing at centromere otr1R

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Genotypes:

FYPO:0004743 - normal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

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Genotypes:

FYPO:0002389 - normal protein localization to heterochromatin at centromere outer repeat

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Warnings

PBO:0000070 - gene structure updated

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