PomBase home

Reference - PMID:17363370 - HULC, a histone H2B ubiquitinating complex, modulates heterochromatin independent of histone methylation in fission yeast.

Reference summary

PubMed ID
PMID:17363370
Title
HULC, a histone H2B ubiquitinating complex, modulates heterochromatin independent of histone methylation in fission yeast.
Authors
Zofall M, Grewal SI
Citation
J Biol Chem 2007 May 11;282(19):14065-72
Publication year
2007
Abstract
Heterochromatin in fission yeast is targeted dynamically by opposing chromatin-modifying activities capable of alleviating or promoting transcriptional gene silencing. In this study, we report the biochemical and genetic characterization of a ubiquitin-conjugating enzyme Rhp6 (a homolog of budding yeast Rad6), which has been shown to negatively affect stability of heterochromatic structures. We show that Rhp6 is a component of the multisubunit protein complex (termed HULC) that also contains two RING finger proteins Rfp1 and Rfp2, sharing homology with budding yeast Bre1 protein and a unique serine-rich protein Shf1. HULC is required for ubiquitination of histone H2B at lysine 119 (H2B-K119), and it localizes to heterochromatic sequences. Moreover, our analyses suggest that Rhp6-induced changes in heterochromatic silencing are mediated predominantly through H2B ubiquitination (ubH2B), and they correlate with increased RNA polymerase II levels at repeat elements embedded within heterochromatin domains. Interestingly, heterochromatic derepression caused by Rhp6 occurs independently of the involvement of HULC subunits and ubH2B in methylation of histone H3 at lysine 4 (H3K4me). These analyses implicate ubH2B in modulation of heterochromatin, which has important implications for dynamics and many functions associated with heterochromatic structures.

Annotation

Comment

PBO:0000271 - chromatin silencing function of H2Bub is independent of H3K4 methylation

Genes:

PBO:0005161 - the chromatin silencing function of H2Bub is independent of H3K4 methylation

Genes:

GO biological process

GO:0040029 - epigenetic regulation of gene expression

Genes:

GO:0140673 - transcription elongation-coupled chromatin remodeling

Genes:

GO cellular component

GO:0033503 - HULC complex

Genes:

GO molecular function

GO:0140850 - histone H2B C-terminal K residue ubiquitin ligase activity

Genes:

GO:0061631 - ubiquitin conjugating enzyme activity

Genes:

Multi-locus phenotype

FYPO:0002360 - normal chromatin silencing at centromere

Genes:

Genotypes:

FYPO:0005072 - normal protein localization to centromeric chromatin

Genes:

Genotypes:

FYPO:0002389 - normal protein localization to heterochromatin at centromere outer repeat

Genes:

Genotypes:

Single locus phenotype

FYPO:0007334 - abolished chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0002922 - abolished histone H2B-K119 ubiquitination during vegetative growth

Genes:

Genotypes:

FYPO:0000883 - decreased histone H3-K9 trimethylation at centromere during vegetative growth

Genes:

Genotypes:

FYPO:0006599 - decreased protein localization to centromeric chromatin during vegetative growth

Genes:

Genotypes:

FYPO:0001122 - elongated vegetative cell

Genes:

Genotypes:

FYPO:0005071 - increased chromatin silencing at centromere

Genes:

Genotypes:

FYPO:0006299 - increased chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0007844 - increased histone H3-K9 monomethylation at centromere during vegetative growth

Genes:

Genotypes:

FYPO:0004237 - increased protein localization to heterochromatin at centromere outer repeat region

Genes:

Genotypes:

FYPO:0007843 - normal nucleosome positioning at centromere

Genes:

Genotypes: