PomBase home

Reference - PMID:18062930 - Functional characterisation of the Schizosaccharomyces pombe homologue of the leukaemia-associated translocation breakpoint binding protein translin and its binding partner, TRAX.

Reference summary

PubMed ID
PMID:18062930
Title
Functional characterisation of the Schizosaccharomyces pombe homologue of the leukaemia-associated translocation breakpoint binding protein translin and its binding partner, TRAX.
Authors
Jaendling A, Ramayah S, Pryce DW, McFarlane RJ
Citation
Biochim Biophys Acta 2008 Feb;1783(2):203-13
Publication year
2008
Abstract
Translin is a conserved protein which associates with the breakpoint junctions of chromosomal translocations linked with the development of some human cancers. It binds to both DNA and RNA and has been implicated in mRNA metabolism and regulation of genome stability. It has a binding partner, translin-associated protein X (TRAX), levels of which are regulated by the translin protein in higher eukaryotes. In this study we find that this regulatory function is conserved in the lower eukaryotes, suggesting that translin and TRAX have important functions which provide a selective advantage to both unicellular and multi-cellular eukaryotes, indicating that this function may not be tissue-specific in nature. However, to date, the biological importance of translin and TRAX remains unclear. Here we systematically investigate proposals that suggest translin and TRAX play roles in controlling mitotic cell proliferation, DNA damage responses, genome stability, meiotic/mitotic recombination and stability of GT-rich repeat sequences. We find no evidence for translin and/or TRAX primary function in these pathways, indicating that the conserved biochemical function of translin is not implicated in primary pathways for regulating genome stability and/or segregation.

Annotation

Comment

PBO:0005090 - undergoes depletion in translin deficient cells via a translin-dependent proteasome independent pathway

Genes:

GO biological process

GO:0000724 - double-strand break repair via homologous recombination

Genes:

GO:0006303 - double-strand break repair via nonhomologous end joining

Genes:

Multi-locus phenotype

FYPO:0001324 - decreased protein level during vegetative growth

Genes:

Genotypes:

FYPO:0000833 - normal protein level during vegetative growth

Genes:

Genotypes:

Single locus phenotype

FYPO:0004287 - decreased double-strand break repair via nonhomologous end joining

Genes:

Genotypes:

FYPO:0004288 - decreased GT repeat stability

Genes:

Genotypes:

FYPO:0001324 - decreased protein level during vegetative growth

Genes:

Genotypes:

FYPO:0001327 - increased protein level during vegetative growth

Genes:

Genotypes:

FYPO:0004286 - normal double-strand break repair via nonhomologous end joining

Genes:

Genotypes:

FYPO:0001037 - normal growth during cellular response to salt stress

Genes:

Genotypes:

FYPO:0000969 - normal growth during cellular response to UV

Genes:

Genotypes:

FYPO:0001690 - normal growth on camptothecin

Genes:

Genotypes:

FYPO:0001023 - normal growth on cisplatin

Genes:

Genotypes:

FYPO:0000963 - normal growth on hydroxyurea

Genes:

Genotypes:

FYPO:0000957 - normal growth on methyl methanesulfonate

Genes:

Genotypes:

FYPO:0004285 - normal growth on mitomycin C

Genes:

Genotypes:

FYPO:0003183 - normal growth on phleomycin

Genes:

Genotypes:

FYPO:0000961 - normal growth on sorbitol

Genes:

Genotypes:

FYPO:0000964 - normal growth on thiabendazole

Genes:

Genotypes:

FYPO:0003891 - normal intragenic meiotic recombination

Genes:

Genotypes:

FYPO:0000503 - normal mitotic recombination

Genes:

Genotypes:

FYPO:0000833 - normal protein level during vegetative growth

Genes:

Genotypes:

FYPO:0001317 - normal RNA level during vegetative growth

Genes:

Genotypes:

FYPO:0000943 - normal spore morphology

Genes:

Genotypes:

FYPO:0001420 - normal vegetative cell population growth rate

Genes:

Genotypes:

FYPO:0000102 - sensitive to cisplatin

Genes:

Genotypes:

FYPO:0000970 - sensitive to mitomycin C

Genes:

Genotypes:

FYPO:0000271 - sensitive to salt stress

Genes:

Genotypes:

FYPO:0000091 - sensitive to thiabendazole

Genes:

Genotypes:

FYPO:0002177 - viable vegetative cell with normal cell morphology

Genes:

Genotypes: