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Reference - PMID:18279662 - Molecular identification and characterization of peptide: N-glycanase from Schizosaccharomyces pombe.

Reference summary

PubMed ID
PMID:18279662
Title
Molecular identification and characterization of peptide: N-glycanase from Schizosaccharomyces pombe.
Authors
Xin F, Wang S, Song L, Liang Q, Qi Q
Citation
Biochem Biophys Res Commun 2008 Apr 18;368(4):907-12
Publication year
2008
Abstract
Peptide:N-glycanase (PNGase) is an enzyme responsible for deglycosylation of misfolded glycoproteins in so-called endoplasmic reticulum-associated degradation (ERAD) system. In this study, we reported the molecular identification and characterization of SpPNGase (Schizosaccharomyces pombe PNGase). Enzymatic analysis revealed that SpPNGase deglycosylated the misfolded glycoproteins and distinguished native and denatured high-mannose glycoproteins in vitro. The deglycosylation activity was lost with the addition of chelating agent EDTA and was not restored by re-addition of metal ions. By construction of deletion mutant, we confirmed that N-terminal alpha-helix of SpPNGase was responsible for the protein-protein interaction. Combining the results from ternary structure prediction and dendrogram analysis, we suggested that the N-terminal alpha-helices of PNGase are derived from evolutionary motif/peptide fusion.

Annotation

GO biological process

GO:0036503 - ERAD pathway

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GO molecular function

GO:0046872 - metal ion binding

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GO:0051787 - misfolded protein binding

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GO:0000224 - peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity

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Modification

MOD:00698 - metal or metal cluster containing modified residue

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Single locus phenotype

FYPO:0000705 - abolished protein-protein interaction

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Genotypes:

FYPO:0000688 - decreased peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity

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Genotypes:

FYPO:0000686 - normal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity

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