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Reference - PMID:18304578 - The 3' ends of mature transcripts are generated by a processosome complex in fission yeast mitochondria.

Reference summary

PubMed ID
PMID:18304578
Title
The 3' ends of mature transcripts are generated by a processosome complex in fission yeast mitochondria.
Authors
Hoffmann B, Nickel J, Speer F, Schafer B
Citation
J Mol Biol 2008 Apr 04;377(4):1024-37
Publication year
2008
Abstract
In this article, we report on the genetic analysis of the Schizosaccharomyces pombe open reading frames SPCC1322.01 and SPAC637.11, respectively, which encode proteins that are similar to the exoribonuclease Dss1p and the RNA helicase Suv3p, respectively, forming the mitochondrial degradosome of Saccharomyces cerevisiae. While the helicase Suv3p is exchangeable between S. cerevisiae and S. pombe, the functions of Dss1p and the putative fission yeast RNase protein are specific for each species. Unlike S. cerevisiae mutants lacking a functional degradosome, the major defect of fission yeast knock-out strains is their inability to perform downstream processing of transcripts. In addition, the lack of pah1 results in instability of mitochondrial RNA ends. Overexpression of par1 and pah1 has no significant effect on the steady-state levels of mitochondrial RNAs. The Pet127p-stimulated RNA degradation activity is independent of Par1p/Pah1p in fission yeast mitochondria. The results presented herein indicate that both fission yeast proteins play only a minor role (if at all) in mitochondrial RNA degradation. We assume that the RNA-degrading function was taken over by other enzymes in fission yeast mitochondria, while the former degradosome proteins were recruited to new cellular pathways, for example, RNA processing in fission yeast (as discussed in this article) or mitochondrial DNA replication, apoptosis, or chromatin maintenance in eukaryotes, during evolution.

Annotation

Complementation

PBO:0024839 - functionally complemented by S. cerevisiae SUV3

Genes:

PBO:0123304 - is not functionally complemented by S. cerevisiae DSS1

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GO biological process

GO:0090616 - mitochondrial mRNA 3'-end processing

Genes:

GO:0000958 - mitochondrial mRNA catabolic process

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GO:0006401 - RNA catabolic process

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GO cellular component

GO:0005739 - mitochondrion

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Multi-locus phenotype

FYPO:0004956 - abnormal mitochondrial RNA 3'-end processing

Genes:

Genotypes:

FYPO:0000082 - decreased cell population growth at high temperature

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Genotypes:

FYPO:0000080 - decreased cell population growth at low temperature

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Genotypes:

FYPO:0003423 - decreased mitochondrial RNA level

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Genotypes:

FYPO:0003424 - increased mitochondrial RNA level

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Genotypes:

FYPO:0004960 - normal mitochondrial RNA level

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Genotypes:

Single locus phenotype

FYPO:0004956 - abnormal mitochondrial RNA 3'-end processing

Genes:

Genotypes:

FYPO:0001934 - abolished cell population growth on glycerol carbon source

Genes:

Genotypes:

FYPO:0004958 - altered RNA level in mitochondrion

Genes:

Genotypes:

FYPO:0000082 - decreased cell population growth at high temperature

Genes:

Genotypes:

FYPO:0000080 - decreased cell population growth at low temperature

Genes:

Genotypes:

FYPO:0001407 - decreased cell population growth on glucose carbon source

Genes:

Genotypes:

FYPO:0000684 - decreased cell population growth on glycerol carbon source

Genes:

Genotypes:

FYPO:0002587 - increased level of mitochondrial polycistronic RNA precursors

Genes:

Genotypes:

FYPO:0000674 - normal cell population growth at high temperature

Genes:

Genotypes:

FYPO:0004960 - normal mitochondrial RNA level

Genes:

Genotypes: