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Reference - PMID:19111658 - HP1 proteins form distinct complexes and mediate heterochromatic gene silencing by nonoverlapping mechanisms.

Reference summary

PubMed ID
PMID:19111658
Title
HP1 proteins form distinct complexes and mediate heterochromatic gene silencing by nonoverlapping mechanisms.
Authors
Motamedi MR, Hong EJ, Li X, Gerber S, Denison C, Gygi S, Moazed D
Citation
Mol Cell 2008 Dec 26;32(6):778-90
Publication year
2008
Abstract
HP1 proteins are a highly conserved family of eukaryotic proteins that bind to methylated histone H3 lysine 9 (H3K9) and are required for heterochromatic gene silencing. In fission yeast, two HP1 homologs, Swi6 and Chp2, function in heterochromatic gene silencing, but their relative contribution to silencing remains unknown. Here we show that Swi6 and Chp2 exist in nonoverlapping complexes and make distinct contributions to silencing. Chp2 associates with the SHREC histone deacetylase complex (SHREC2), is required for histone H3 lysine 14 (H3K14) deacetylation, and mediates transcriptional repression by limiting RNA polymerase II access to heterochromatin. In contrast, Swi6 associates with a different set of nuclear proteins and with noncoding centromeric transcripts and is required for efficient RNAi-dependent processing of these transcripts. Our findings reveal an unexpected role for Swi6 in RNAi-mediated gene silencing and suggest that different HP1 proteins ensure full heterochromatic gene silencing through largely nonoverlapping inhibitory mechanisms.

Annotation

GO biological process

GO:0006325 - chromatin organization

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GO cellular component

GO:0070824 - SHREC complex

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GO molecular function

GO:0003723 - RNA binding

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Multi-locus phenotype

FYPO:0003094 - decreased centromeric outer repeat transcript level

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FYPO:0003411 - decreased chromatin silencing at centromere inner repeat

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FYPO:0003412 - decreased chromatin silencing at centromere outer repeat

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FYPO:0004604 - decreased chromatin silencing at subtelomere

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Single locus phenotype

FYPO:0005850 - abolished protein localization to heterochromatin at centromere outer repeat

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FYPO:0000273 - centromeric outer repeat transcripts absent

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FYPO:0003094 - decreased centromeric outer repeat transcript level

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FYPO:0006684 - decreased centromeric transcript binding

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FYPO:0003411 - decreased chromatin silencing at centromere inner repeat

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FYPO:0003412 - decreased chromatin silencing at centromere outer repeat

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FYPO:0002827 - decreased chromatin silencing at silent mating-type cassette

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FYPO:0004604 - decreased chromatin silencing at subtelomere

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FYPO:0000966 - increased histone H3-K14 acetylation at centromere outer repeat during vegetative growth

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FYPO:0006681 - increased histone H3-K9 acetylation at centromere inner repeat during vegetative growth

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FYPO:0006300 - increased protein localization to heterochromatin at centromere inner repeat

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FYPO:0004237 - increased protein localization to heterochromatin at centromere outer repeat region

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FYPO:0002567 - normal centromeric outer repeat transcript level

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FYPO:0003555 - normal chromatin silencing at subtelomere

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FYPO:0006683 - normal histone H3-K9 methylation at centromere inner repeat during vegetative growth

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FYPO:0003235 - normal histone H3-K9 methylation at centromere outer repeat during vegetative growth

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FYPO:0002389 - normal protein localization to heterochromatin at centromere outer repeat

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