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Reference - PMID:19362535 - High-affinity binding of Chp1 chromodomain to K9 methylated histone H3 is required to establish centromeric heterochromatin.

Reference summary

PubMed ID
PMID:19362535
Title
High-affinity binding of Chp1 chromodomain to K9 methylated histone H3 is required to establish centromeric heterochromatin.
Authors
Schalch T, Job G, Noffsinger VJ, Shanker S, Kuscu C, Joshua-Tor L, Partridge JF
Citation
Mol Cell 2009 Apr 10;34(1):36-46
Publication year
2009
Abstract
In fission yeast, assembly of centromeric heterochromatin requires the RITS complex, which consists of Ago1, Tas3, Chp1, and siRNAs derived from centromeric repeats. Recruitment of RITS to centromeres has been proposed to depend on siRNA-dependent targeting of Ago1 to centromeric sequences. Previously, we demonstrated that methylated lysine 9 of histone H3 (H3K9me) acts upstream of siRNAs during heterochromatin establishment. Our crystal structure of Chp1's chromodomain in complex with a trimethylated lysine 9 H3 peptide reveals extensive sites of contact that contribute to Chp1's high-affinity binding. We found that this high-affinity binding is critical for the efficient establishment of centromeric heterochromatin, but preassembled heterochromatin can be maintained when Chp1's affinity for H3K9me is greatly reduced.

Annotation

GO biological process

GO:0031507 - heterochromatin formation

Genes:

GO cellular component

GO:0000779 - condensed chromosome, centromeric region

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GO molecular function

GO:0140463 - chromatin-protein adaptor activity

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GO:0062072 - histone H3K9me2/3 reader activity

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Multi-locus phenotype

FYPO:0003044 - abnormal heterochromatin assembly

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Genotypes:

FYPO:0005306 - abnormal protein localization to centromeric chromatin during vegetative growth

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Genotypes:

FYPO:0007334 - abolished chromatin silencing at centromere outer repeat

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Genotypes:

FYPO:0000877 - decreased histone H3-K9 dimethylation at centromere during vegetative growth

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Genotypes:

FYPO:0006599 - decreased protein localization to centromeric chromatin during vegetative growth

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Genotypes:

FYPO:0000220 - increased centromeric outer repeat transcript level

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Genotypes:

FYPO:0000228 - lagging mitotic chromosomes

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Genotypes:

FYPO:0002837 - normal centromeric outer repeat transcript-derived siRNA level

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Genotypes:

FYPO:0004742 - normal chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0003099 - normal heterochromatin assembly

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Genotypes:

FYPO:0000862 - normal histone H3-K9 dimethylation at centromere during vegetative growth

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Genotypes:

Single locus phenotype

FYPO:0003431 - abolished histone H3K9me binding

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Genotypes:

FYPO:0002835 - centromeric outer repeat transcript-derived siRNA absent

Genes:

Genotypes:

FYPO:0004201 - decreased centromeric outer repeat transcript-derived siRNA level

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Genotypes:

FYPO:0003412 - decreased chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0008195 - decreased histone H3-K9Me binding

Genes:

Genotypes:

FYPO:0006599 - decreased protein localization to centromeric chromatin during vegetative growth

Genes:

Genotypes:

FYPO:0004982 - increased centromeric transcript level

Genes:

Genotypes:

FYPO:0008196 - increased histone H3-K9Me binding

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Genotypes:

FYPO:0000228 - lagging mitotic chromosomes

Genes:

Genotypes:

FYPO:0002837 - normal centromeric outer repeat transcript-derived siRNA level

Genes:

Genotypes:

FYPO:0004742 - normal chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0008070 - normal histone H3-K9 methylation at centromere during vegetative growth

Genes:

Genotypes:

FYPO:0003241 - unequal mitotic sister chromatid segregation

Genes:

Genotypes: