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Reference - PMID:20106903 - Schizosaccharomyces pombe possesses two paralogous valyl-tRNA synthetase genes of mitochondrial origin.

Reference summary

PubMed ID
PMID:20106903
Title
Schizosaccharomyces pombe possesses two paralogous valyl-tRNA synthetase genes of mitochondrial origin.
Authors
Chiu WC, Chang CP, Wen WL, Wang SW, Wang CC
Citation
Mol Biol Evol 2010 Jun;27(6):1415-24
Publication year
2010
Abstract
Previous studies showed that VAS1 of Saccharomyces cerevisiae encodes both cytosolic and mitochondrial forms of valyl-tRNA synthetase (ValRS) through alternative initiation of translation. We show herein that except for Schizosaccharomyces pombe, all yeast species studied contained a single ValRS gene encoding both forms, and all of the mature protein forms deduced from those genes possessed an N-terminal appended domain (Ad) that was absent from their bacterial relatives. In contrast, S. pombe contained two distinct nuclear ValRS genes, one encoding the mitochondrial form and the other its cytosolic counterpart. Although the cytosolic form closely resembles other yeast ValRS sequences (approximately 60% identity), the mitochondrial form exhibits significant divergence from others (approximately 35% identity). Both genes are active and essential for the survival of the yeast. Most conspicuously, the mitochondrial form lacks the characteristic Ad. A phylogenetic analysis further suggested that both forms of S. pombe ValRS are of mitochondrial origin, and the mitochondrial form is ancestral to the cytoplasmic form.

Annotation

Complementation

PBO:0011986 - does not functionally complement S. cerevisiae VAS1

Genes:

PBO:0012024 - functionally complements S. cerevisiae VAS1

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GO biological process

GO:0002181 - cytoplasmic translation

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GO:0032543 - mitochondrial translation

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GO cellular component

GO:0005737 - cytoplasm

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GO molecular function

GO:0004832 - valine-tRNA ligase activity

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Protein sequence feature

SO:0001808 - mitochondrial_targeting_signal

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Single locus phenotype

FYPO:0001110 - inviable after spore germination, multiple cell divisions, normal morphology

Genes:

Genotypes:

FYPO:0002151 - inviable spore

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Genotypes:

FYPO:0002061 - inviable vegetative cell population

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Genotypes: